------- SECIS element -- id:1 -- grade:B ---- Chromosome = gi|408541724|gb|JH947208.1|:subseq_11008524,203479_ Strand = + Positions = 92328 - 92370 Found by: Infernal (score=11.06) Stem2 length = 9 Apical loop length = 19 Insertion in stem2 = 0, 0 Free Energy = -5.91 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uccgggcaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugcccggc -----------------[[[(((((((((...................)))))))))]]]------------------ target -----------------GAAAACAGAGAUAUAAAUCCAUAAAGAAUCGGUUUCUGUUGGA------------------ *** ^^^ *** SEQUENCIA FASTA >SECIS.1 chromosome:gi|408541724|gb|JH947208.1|:subseq_11008524,203479_ strand:+ positions:92328-92370 GAAAACAGAGAUAUAAAUCCAUAAAGAAUCGGUUUCUGUUGGA SECIS id: 1 Predicted by: Infernal (score 11.06) Covels score: 0.0 Free Energy of structure: -5.91 Target name: gi|408541724|gb|JH947208.1|:subseq_11008524,203479_ Positions on target: 92328-92370 Strand: + SECIS grade: B SEQ GAAAACAGAGAUAUAAAUCCAUAAAGAAUCGGUUUCUGUUGGA SS [[[(((((((((...................)))))))))]]]