T-COFFEE, Version_9.03.r1318 (2012-07-12 19:05:45 - Revision 1318 - Build 366)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
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BAD AVG GOOD
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Homo : 99
Pan : 99
Mus : 98
Macaca : 99
Chlorocebus : 98
cons : 99
Homo 1 MAVYRAALGASLAAARLLP--LGRCSPSPAPRSTLSGAA 37
Pan 1 MAAHRAAPGASLAAARLLP--LSRCSPSPAPRSTLSGAA 37
Mus 1 MASVRAAVGASLAVARTRPRCVGLALPSSAPRSAW-AAA 38
Macaca 1 MAAYRAALGGSLAAARLLP--LGRCHPSPAPGSTLSGAA 37
Chlorocebus 1 MAAYRAALGGSLAAARLLP--LGRCHPSPAPGSTLSGAA 37
cons 1 ** *** *.***.** * :. . **.** *: .** 39
Homo 38 MEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRP 76
Pan 38 MEPAPRWLAGLRFDNRALRALPVETPPPGPEGAPSAPRP 76
Mus 39 MEPTPRWLAGLRFDNRALRELPVETPPPGPEDSLATPRP 77
Macaca 38 MEPAPCWLAGLRFDNRALRALPVEAPPPGPEGAQSAPRQ 76
Chlorocebus 38 MEPAPCWLAGLRFDNRALRALPVEAPPPGPEGAQSAPRP 76
cons 40 ***:* ************* ****:******.: ::** 78
Homo 77 VPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPARE 115
Pan 77 VPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPARE 115
Mus 78 VPGACFSRARPAPLRRPRLVALSEPALALLGLEASEEAE 116
Macaca 77 VPGACFTRVRPTPLRQPRLVALSEPALALLGLGAPPARE 115
Chlorocebus 77 VPGACFTRVRPTPLRQPRLVALSEPALALLGLGAPPARE 115
cons 79 ******:*.:*:***:**************** *. * 117
Homo 116 A--EAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQL 152
Pan 116 A--EAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQL 152
Mus 117 V--EAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQL 153
Macaca 116 A--EAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQL 152
Chlorocebus 116 AEAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQL 154
cons 118 . ****************:******************* 156
Homo 153 GDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRK 191
Pan 153 GDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRK 191
Mus 154 GDGAAMYLGEVCTAAGERWELQLKGAGPTPFSRQADGRK 192
Macaca 153 GDGAAMYLGEVCTAAGERWELQLKGAGPTPFSRQADGRK 191
Chlorocebus 155 GDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRK 193
cons 157 **************:************************ 195
Homo 192 VLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDV 230
Pan 192 VLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDV 230
Mus 193 VLRSSIREFLCSEAMFHLGIPTTRAGACVTSESTVMRDV 231
Macaca 192 VLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDV 230
Chlorocebus 194 VLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDV 232
cons 196 *******************:***************:*** 234
Homo 231 FYDGNPKYEQCTVVLRVASTFIRFGSFEIFKSADEHTGR 269
Pan 231 FYDGNPKYEQCTVVLRVASTFIRFGSFEIFKSADEHTGR 269
Mus 232 FYDGNPKYEKCTVVLRIAPTFIRFGSFEIFKPPDEHTGR 270
Macaca 231 FYDGNPKYEQCTVVLRIASTFIRFGSFEIFKSADEHTGR 269
Chlorocebus 233 FYDGNPKYEQCTVVLRIASTFIRFGSFEIFKSADEHTGR 271
cons 235 *********:******:*.************..****** 273
Homo 270 AGPSVGRNDIRVQLLDYVISSFYPEIQAAHAS--DSVQR 306
Pan 270 AGPSVGRNDIRVQLLDYVISSFYPEIQAAHAS--DSVQR 306
Mus 271 AGPSVGRDDIRVQLLDYVISSFYPEIQAAHTCDTDNIQR 309
Macaca 270 AGPSVGRNDIRVQLLDYVISSFYPEIQAAHTS--DRVQR 306
Chlorocebus 272 AGPSVGRNDIRVQLLDYVISSFYPEIQAAHAS--DRVQR 308
cons 274 *******:**********************:. * :** 312
Homo 307 NAAFFREVTRRTARMVAEWQCVGFCHGVLNTDNMSILGL 345
Pan 307 NAAFFPEVTQRTARMVAEWQCVGFCHGVLNTDNMSILGL 345
Mus 310 NAAFFREVTQRTARMVAEWQCVGFCHGVLNTDNMSIVGL 348
Macaca 307 NAAFFREVTRRTAWMVAEWQCVGFCHGVLNTDNMSILGL 345
Chlorocebus 309 NAAFFREVTRRTAWMVAEWQCVGFCHGVLNTDNMSILGL 347
cons 313 ***** ***:*** **********************:** 351
Homo 346 TIDYGPFGFLDRYDPDHVCNASDNTGRYAYSKQPEVCRW 384
Pan 346 TIDYGPFGFLDRYDPDHVCNASDNTGRYAYSKQPEVCRW 384
Mus 349 TIDYGPFGFLDRYDPDHICNASDNAGRYTYSKQPQVCKW 387
Macaca 346 TIDYGPFGFLDRYDPDHVCNASDNTGRYAYSKQPEVCKW 384
Chlorocebus 348 TIDYGPFGFLDRYDPDHVCNASDNTGRYAYSKQPEVCKW 386
cons 352 *****************:******:***:*****:**:* 390
Homo 385 NLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQKMR 423
Pan 385 NLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQKMR 423
Mus 388 NLQKLAEALEPELPLALAEAILKEEFDTEFQRHYLQKMR 426
Macaca 385 NLQKLAEALQPELPLELGEAILAEEFDAEFQRHYMQKMR 423
Chlorocebus 387 NLQKLAEALQPELPLELGEAILAEEFDAEFQRHYMQKMR 425
cons 391 **:******:***** *.**** ****:******:**** 429
Homo 424 RKLGLVQVELEEDGALVSKLLETMHLTGADFTNTFYLLS 462
Pan 424 RKLGLVQVELEEDGALVSKLLETMHLTG----------- 451
Mus 427 KKLGLIRVEKEEDGTLVAKLLETMHLTGADFTNTFCVLS 465
Macaca 424 RKLGLVQLELEEDRALVSKLLETMHLTGADFTNTFFLLS 462
Chlorocebus 426 RKLGLVRLELEEDKALVSKLLETMHLTGADFTNTFFLLS 464
cons 430 :****:::* *** :**:********** 468
Homo 463 SFPVELESPGLAEFLARLMEQCASLEELRLAFRPQMDPR 501
Pan 452 --------------------------------------R 452
Mus 466 SFPADLSD--SAEFLSRLTSQCASLEELRLAFRPQMDPR 502
Macaca 463 SFPVELESPGLAEFLARLMEQCASLEELRLAFRPQMDPR 501
Chlorocebus 465 SFPVELESPGLAEFLARLMEQCASLEELRLAFRPQMDPR 503
cons 469 * 507
Homo 502 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 540
Pan 453 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 491
Mus 503 QLSMMLMLAQSNPQLFALIGTQANVTKELERVEHQSRLE 541
Macaca 502 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 540
Chlorocebus 504 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 542
cons 508 ******************:**:*.:::******:***** 546
Homo 541 QLSAAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAW 579
Pan 492 QLSAAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAW 530
Mus 542 QLSPSDLQRKNRDHWEAWLQEYRDRLDKEKEGVGDTAAW 580
Macaca 541 QLSMAELQSRNQGHWAEWLQAYRARLDKDLEGAGDAAAW 579
Chlorocebus 543 QLSMAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAW 581
cons 547 *** ::** :*:.** *** ** ****: **.**:*** 585
Homo 580 QAEHVRVMHANNPKYVLRNYIAQNAIEAAERGDFSEVRR 618
Pan 531 QAEHVRVMHANNPKYVLRNYIAQNAIEAAERGD---VRR 566
Mus 581 QAERVRVMRANNPKYVLRNYIAQKAIEAAENGDFSEVRR 619
Macaca 580 QAERVRVMHANNPKYVLRNYIAQNAIEAAERGDFSEVRR 618
Chlorocebus 582 QAERVRVMHASNPKYVLRNYIAQNAIEAAERGDFSEVRR 620
cons 586 ***:****:*.************:******.** *** 624
Homo 619 VLKLLETPYHCEAGAATDAEATEADGADGRQRSYSSKPP 657
Pan 567 VLKLLETPYHCESGAATDAEATEANGADGRQRSYSSKPP 605
Mus 620 VLKLLESPYHSEEE-ATGPEAVAR--STEEQSSYSNRPP 655
Macaca 619 VLKLLENPYHCEAGAATDPEATEADGADGRQRSYSSKPP 657
Chlorocebus 621 VLKLLENPYHCEAGAATDPEATEANGADSRQRSYSSKPP 659
cons 625 ******.***.* **..**. : .* ***.:** 663
Homo 658 LWAAELCVTUSS 669
Pan 606 LWAAELCVTUSS 617
Mus 656 LWAAELCVTUSS 667
Macaca 658 LWAAELCVTUSS 669
Chlorocebus 660 LWAAELCVTUSS 671
cons 664 ************ 675