genewise output
Score 286.25 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00001339_2.0    1 MAAGLSGWLVPTFGLRLLLATVLQA                       V 
                     MAAGLSGWLVPTFGLRLLLATVLQA                       V 
                     MAAGLSGWLVPTFGLRLLLATVLQA                       V 
gi|511782573|g100000 agggcagtcgcatgcctttgagccgGTGAGTG  Intron 1   CAGg 
                     tccgtgggttcctgtgtttccttac<0-----[100075:11076-0>t 
                     gttggtggggggtgagggggtgtag                       t 


SPP00001339_2.0   27 SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
                     SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
                     SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
gi|511782573|g110768 tgtgggtttggtagtgttaatctattgccgctaccccgcgtagttcggg 
                     cctgcatccacggatgtcgattggcgattgatattatacagggggaaac 
                     tttgagtaagacagacttccgcccttttcagccgtggtttcaactggaa 


SPP00001339_2.0   76 QFETKK                       LYAGAILEVCGXKLGRFPQV 
                     QFETKK                       LYAGAILEVCGXKLGRFPQV 
                     QFETKK                       LYAGAILEVCGXKLGRFPQV 
gi|511782573|g110915 ctgaaaGTACTGT  Intron 2   TAGctgggacggtgtatgatccg 
                     atacaa<0-----[110933:13129-0>tacgcttatgggatggtcat 
                     atacag                       gtaatttattaaagagctac 


SPP00001339_2.0  102 Q                          FVRSDKPKLFRGLQIK       
                     Q                          FVRSDKPKLFRGLQIK       
                     Q          A:A[gct]        FVRSDKPKLFRGLQIK       
gi|511782573|g131355 cGGTATATA  Intron 3   AAGCTtgaagacattagccaa       
                     a <1-----[131359:14364-1>  ttggaacattggtata       
                     a                          ctgttacagcaaaacg       


SPP00001339_2.0  120                        YVRGSDPILKLLDDNGNIAEELSILK 
                                            YVRGSDP+LKLLDDNGNIAEELSILK 
                                            YVRGSDPVLKLLDDNGNIAEELSILK 
gi|511782573|g143692 GTAAGGT  Intron 4   TAGtgcgtgcgtactggagaagggcaaca 
                     <0-----[143692:14836-0>atggcacttattaaagatcaatgtta 
                                            tcttactaagtgtctgcttaaactca 


SPP00001339_2.0  146 WNTDSVEEFLSEKLERI                                 
                     WNTDSVEEFLSEKLERI                                 
                     WNTDSVEEFLSEKLERI                                 
gi|511782573|g148439 taagagggtcagatgca                                 
                     gacagtaattgaatagt                                 
                     gcactaaacgtaggaca                                 


//
Making a A in phase 1 intron
>gi|511782573|gb|CM001961.1|:subseq(46446924,248489).pep
MAAGLSGWLVPTFGLRLLLATVLQAVSAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNL
LQLDPDCRGCCQEEAQFETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKY
VRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLERI
//
>gi|511782573|gb|CM001961.1|:subseq(46446924,248489).[100000:148489].sp
ATGGCTGCTGGGCTGAGTGGGTGGCTGGTGCCGACGTTTGGGCTACGGTTGTTGTTGGCG
ACTGTGCTTCAAGCGGTTTCTGCTTTTGGGGCAGAGTTTTCATCAGAGGCATGCAGAGAG
TTAGGCTTTTCTAGCAACTTGCTCTGCAGCTCTTGTGATCTTCTCGGACAGTTCAACCTG
CTTCAGCTGGATCCTGATTGCAGAGGATGCTGTCAGGAGGAAGCACAATTTGAAACCAAA
AAGCTGTATGCAGGAGCTATTCTTGAAGTTTGTGGATGAAAATTGGGAAGGTTCCCTCAA
GTCCAAGCTTTCGTTAGGAGTGATAAACCCAAATTGTTCAGAGGACTACAAATCAAGTAT
GTCCGTGGTTCAGACCCTGTATTAAAGCTTTTGGATGACAATGGGAACATTGCTGAAGAA
CTAAGCATTCTCAAATGGAACACAGACAGTGTAGAAGAATTCCTGAGTGAAAAGTTGGAA
CGCATA
//
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	match	100000	148489	286.25	+	.	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	cds	100000	100074	0.00	+	0	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	intron	100075	110764	0.00	+	.	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	cds	110765	110932	0.00	+	0	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	intron	110933	131294	0.00	+	.	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	cds	131295	131358	0.00	+	0	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	intron	131359	143641	0.00	+	.	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	cds	143642	143691	0.00	+	2	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	intron	143692	148360	0.00	+	.	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(46446924,248489)	GeneWise	cds	148361	148489	0.00	+	0	gi|511782573|gb|CM001961.1|:subseq(46446924,248489)-genewise-prediction-1
//