Command line: [exonerate -m p2g --showtargetgff -q GPx7.fa.U_to_X -t gi|511782573|gb|CM001961.1|.fastasubseq]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00001324_2.0 # Protein # Glutathione peroxidase 7 (GPx7) # Macaque (Macaca mulatta) 
        Target: gi|511782573|gb|CM001961.1|:subseq(80235774,202043) Chlorocebus sabaeus isolate 1994-021 chromosome 20, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 736
   Query range: 0 -> 145
  Target range: 102043 -> 99999

      1 : GlnValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrA :     20
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          GlnValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrA
 102043 : CAGGTATCCCTGGTGGTGAATGTGGCCAGCGAGTGCGGCTTCACAGACCAGCACTACC : 101986

     21 : rgAlaLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAlaPh :     39
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          rgAlaLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAlaPh
 101985 : GGGCCCTGCAGCAGCTGCAGCGGGACCTGGGTCCCCACCACTTCAACGTGCTCGCCTT : 101929

     40 : eProCysAsnGlnPheGlyGlnGlnGluProAspSerAsnLysGluIleGluSerPhe :     58
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          eProCysAsnGlnPheGlyGlnGlnGluProAspSerAsnLysGluIleGluSerPhe
 101928 : CCCCTGCAACCAGTTTGGCCAACAGGAGCCTGACAGCAACAAGGAGATTGAGAGCTTT : 101872

     59 : AlaArgArgThrTyrSerValSerPheProMetPheSerLysIleAlaValThrGlyT :     78
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          AlaArgArgThrTyrSerValSerPheProMetPheSerLysIleAlaValThrGlyT
 101871 : GCCCGCCGCACCTACAGTGTCTCATTCCCCATGTTTAGCAAGATTGCAGTCACTGGTA : 101812

     79 : hrGlyAlaHisProAlaPheLysTyrLeuAlaArgLysSerTrpPheLeuHisProLe :     97
          ||||||||||||||||||||||||||||||||||||||||||||! !|||||||||||
          hrGlyAlaHisProAlaPheLysTyrLeuAlaArgLysSerTrpSerLeuHisProLe
 101811 : CTGGTGCCCATCCTGCCTTCAAGTACCTGGCCCGTAAGTCGTGGTCTCTTCATCCCCT : 101755

     98 : uThrProProTrpLeuArgProTrp  >>>> Target Intron 1 >>>>  LeuP :    107
          |||||||||||||||||||||||||           1609 bp             !|
          uThrProProTrpLeuArgProTrp-+                         ++GluP
 101754 : CACACCTCCCTGGCTGAGGCCATGGct.........................agGAGC : 100116

    108 : roThrTrpAsnPheTrpLysTyrLeuValAlaProAspGlyLysValValGlyAlaTr :    126
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          roThrTrpAsnPheTrpLysTyrLeuValAlaProAspGlyLysValValGlyAlaTr
 100115 : CCACCTGGAACTTCTGGAAGTACCTTGTAGCCCCAGATGGAAAGGTGGTAGGGGCTTG : 100059

    127 : pAspProThrValSerValGluGluValArgProGlnIleThrAlaLeuValArgLys :    145
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          pAspProThrValSerValGluGluValArgProGlnIleThrAlaLeuValArgLys
 100058 : GGACCCAACTGTGTCAGTGGAGGAGGTCAGACCCCAGATCACAGCGCTCGTGAGGAAG : 100002

vulgar: SPP00001324_2.0 0 145 . gi|511782573|gb|CM001961.1|:subseq(80235774,202043) 102043 99999 - 736 M 105 315 5 0 2 I 0 1605 3 0 2 M 40 120
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-05
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	gene	100000	102043	736	-	.	gene_id 1 ; sequence SPP00001324_2.0 ; gene_orientation +
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	cds	101729	102043	.	-	.	
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	exon	101729	102043	.	-	.	insertions 0 ; deletions 0
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	splice5	101727	101728	.	-	.	intron_id 1 ; splice_site "CT"
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	intron	100120	101728	.	-	.	intron_id 1
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	splice3	100120	100121	.	-	.	intron_id 0 ; splice_site "AG"
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	cds	100000	100119	.	-	.	
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	exon	100000	100119	.	-	.	insertions 0 ; deletions 0
gi|511782573|gb|CM001961.1|:subseq(80235774,202043)	exonerate:protein2genome:local	similarity	100000	102043	736	-	.	alignment_id 1 ; Query SPP00001324_2.0 ; Align 102044 1 315 ; Align 100120 106 120
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis