T-Coffee alignment result

MSA The multiple sequence alignment result as produced by T-coffee.

T-COFFEE, Version_10.00.r1580 (2013-10-01 16:11:20 - Revision 1580 - Build 429)
Cedric Notredame 
SCORE=98
*
 BAD AVG GOOD
*
SPP00000144_2.0   :  99
SPP00000145_2.0   :  99
cons              :  98

SPP00000144_2.0       1 MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPAR   63 
SPP00000145_2.0       1 MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPAR   63 

cons                  1 ***************************************************************   63 


SPP00000144_2.0      64 LRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQ  126 
SPP00000145_2.0      64 LRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQ  126 

cons                 64 ***************************************************************  126 


SPP00000144_2.0     127 SAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPG  189 
SPP00000145_2.0     127 SAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPG  189 

cons                127 ***************************************************************  189 


SPP00000144_2.0     190 GPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISL  252 
SPP00000145_2.0     190 GPEAPETEAPQGIPELIE---------------------------------------------  207 

cons                190 ******************                                               252 


SPP00000144_2.0     253 GDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAA  315 
SPP00000145_2.0     208 ----------VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAA  260 

cons                253           *****************************************************  315 


SPP00000144_2.0     316 LISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQ  378 
SPP00000145_2.0     261 LISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQ  323 

cons                316 ***************************************************************  378 


SPP00000144_2.0     379 YLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNT  441 
SPP00000145_2.0     324 YLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNT  386 

cons                379 ***************************************************************  441 


SPP00000144_2.0     442 CRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDDYSVIGRSLFKKETNIQLFV  504 
SPP00000145_2.0     387 CRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERVASAPS-----------------  432 

cons                442 ****************************************. .  *                   504 


SPP00000144_2.0     505 GLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEATRQEESAE  567 
SPP00000145_2.0     433 ---------------------------------------------------------------  432 

cons                505                                                                  567 


SPP00000144_2.0     568 RSEPSQHVVLSLTFKRYVFDTHKRMVQSP  596 
SPP00000145_2.0     433 -------------------------PRRS  436 

cons                568                           : .  596