T-Coffee alignment result

MSA The multiple sequence alignment result as produced by T-coffee.

T-COFFEE, Version_10.00.r1580 (2013-10-01 16:11:20 - Revision 1580 - Build 429)
Cedric Notredame 
SCORE=99
*
 BAD AVG GOOD
*
SPP00000137_2.0   :  99
SPP00000138_2.0   :  98
SPP00000139_2.0   :  99
SPP00000140_2.0   :  98
cons              :  99

SPP00000137_2.0       1 MEDQ------------------------------AGQRDYDLLVVGGGSGGLACAKEAAQLGR   33 
SPP00000138_2.0       1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGR   63 
SPP00000139_2.0       1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARG-----------------------AAAAQLGR   40 
SPP00000140_2.0       1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGA-AGQRDYDLLVVGGGSGGLACAKEAAQLGR   62 

cons                  1                                                        ******   63 


SPP00000137_2.0      34 KVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWR   96 
SPP00000138_2.0      64 KVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWR  126 
SPP00000139_2.0      41 KVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWR  103 
SPP00000140_2.0      63 KVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWR  125 

cons                 64 ***************************************************************  126 


SPP00000137_2.0      97 KMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATG  159 
SPP00000138_2.0     127 KMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATG  189 
SPP00000139_2.0     104 KMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATG  166 
SPP00000140_2.0     126 KMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATG  188 

cons                127 ***************************************************************  189 


SPP00000137_2.0     160 GRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP  222 
SPP00000138_2.0     190 GRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP  252 
SPP00000139_2.0     167 GRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP  229 
SPP00000140_2.0     189 GRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP  251 

cons                190 ***************************************************************  252 


SPP00000137_2.0     223 LRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWA  285 
SPP00000138_2.0     253 LRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWA  315 
SPP00000139_2.0     230 LRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWA  292 
SPP00000140_2.0     252 LRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWA  314 

cons                253 ***************************************************************  315 


SPP00000137_2.0     286 IGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLL  348 
SPP00000138_2.0     316 IGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLL  378 
SPP00000139_2.0     293 IGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLL  355 
SPP00000140_2.0     315 IGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLL  377 

cons                316 ***************************************************************  378 


SPP00000137_2.0     349 VQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGR  411 
SPP00000138_2.0     379 VQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGR  441 
SPP00000139_2.0     356 VQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGR  418 
SPP00000140_2.0     378 VQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGR  440 

cons                379 ***************************************************************  441 


SPP00000137_2.0     412 DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEV  474 
SPP00000138_2.0     442 DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEV  504 
SPP00000139_2.0     419 DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEV  481 
SPP00000140_2.0     441 DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEV  503 

cons                442 ***************************************************************  504 


SPP00000137_2.0     475 VKLRISKRSGLDPTVTGCUG  494 
SPP00000138_2.0     505 VKLRISKRSGLDPTVTGCUG  524 
SPP00000139_2.0     482 VKLRISKRSGLDPTVTGCUG  501 
SPP00000140_2.0     504 VKLRISKRSGLDPTVTGCUG  523 

cons                505 ********************  524