T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=98
*
BAD AVG GOOD
*
JH127572.1 : 98
SPP00000079_1.0 : 98
cons : 98
JH127572.1 ---------------------------------------------
SPP00000079_1.0 MPVDDCWLYFPASRGRTFVQTVWVAPTCPNCCWFPGFLPPVPRPP
cons
JH127572.1 ---------------------------------------------
SPP00000079_1.0 HVPRVLLRGPRGAVLPASRPSKTLPSSSQTPCPTDPCICPPPSTP
cons
JH127572.1 -------------HKEGKLHALLEINKGTPVMNTYDYDLIILGGG
SPP00000079_1.0 DSRQEKNTQSELPNKKGQLQKLPTMNGSKDPPGSYDFDLIIIGGG
cons :*:*:*: * :* .. .:**:****:***
JH127572.1 SGGLAAAKNS-EAAKYEKKVMVLDFVSPTPRGNRWGLGGTCVNVG
SPP00000079_1.0 SGGLAAAKARLSAAKFDKKVLVLDFVTPTPLGTRWGLGGTCVNVG
cons ******** .***::***:*****:*** *.************
JH127572.1 CIPKKLMHQATLLGKALNDACIFGWEI------------------
SPP00000079_1.0 CIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSH
cons **********:***:**:*: :**::
JH127572.1 --------------------------------KAKDSKGKETFYT
SPP00000079_1.0 IGSLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYS
cons *.:.****.:*:
JH127572.1 AEVFIISTGERPMYLGIPGDKEYCITSDDLFSFPYCPGKTLIVGA
SPP00000079_1.0 AERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGA
cons ** *:*:***** ************:******:********:***
JH127572.1 SYVALECAGILAGLGLEVTVMVRSVLLRGFDQQMANKIGDHMEES
SPP00000079_1.0 SYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEH
cons *********:***:**:*******:*******:******:****
JH127572.1 GIKFIRHFVPTKVGSV-----------------------------
SPP00000079_1.0 GIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVL
cons ******:*****: .:
JH127572.1 ---------------------------------------------
SPP00000079_1.0 LAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIG
cons
JH127572.1 -------------------------------CDYENVPTTIFTPL
SPP00000079_1.0 DILEGKLELTPVAIQAGRLLAQRLYGGSNVKCDYDNVPTTVFTPL
cons ***:*****:****
JH127572.1 EYGTCGLSEERAIEKYGERDIEVYHSHFFPLEWTLTSKDKNKCYA
SPP00000079_1.0 EYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYA
cons *** ******:*:**:**.:******.*:*****:.*:*:*****
JH127572.1 KIICRIKDNYRVIGFHLFGPNAGEITQGFAAAMKCGITKEQLDST
SPP00000079_1.0 KIICNLKDDERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDST
cons ****.:**: **:***::******:*******:***:**:*****
JH127572.1 IGIHPVCAEIFINLTATKRSGADIRVSGCG-
SPP00000079_1.0 IGIHPVCAEIFTTLSVTKRSGGDILQSGCXG
cons *********** .*:.*****.** ***