T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=100
*
 BAD AVG GOOD
*
JH128982.1        : 100
gi|49250501|gb|   : 100
cons              : 100

JH128982.1        MSVRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL
gi|49250501|gb|   MSVRESFNPESYELDKSFRLTRFAELKGTGCKVPQDVLQKLLESL

cons              ***********************:*********************


JH128982.1        QENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIY
gi|49250501|gb|   QENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIY

cons              *********************************************


JH128982.1        PIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDK
gi|49250501|gb|   PIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKLTDR

cons              *************************************:***:**:


JH128982.1        ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVC
gi|49250501|gb|   ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWVVLGGVATTVC

cons              **********************************:**********


JH128982.1        QPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIK
gi|49250501|gb|   QPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIK

cons              *********************************************


JH128982.1        LVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFG
gi|49250501|gb|   LVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFG

cons              *********************************************


JH128982.1        ILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHG
gi|49250501|gb|   ILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHG

cons              *********************************************


JH128982.1        TCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKG
gi|49250501|gb|   SCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKG

cons              :********************************************


JH128982.1        NRTARIIDKPRIIEVAPQVATQNVNPTPGATS
gi|49250501|gb|   NRTARIIDKPRIIEVAPQVASQNVNPTPGATS

cons              ********************:***********