T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=100
*
 BAD AVG GOOD
*
JH126660.1        : 100
gi|372622386|re   : 100
cons              : 100

JH126660.1        MTHIAKTFYDLHATNLDGEKVDFNIFRGRVVLIENVASL-GTTVR
gi|372622386|re   MAYIAKSFYDLYATNIDGEKVDFNVFRGRVVLIENVASLXDTTVR

cons              *::***:****:***:********:************** .****


JH126660.1        DYSQLQELQTRYPHRLTVLAFPCNQFGYQENCNNEEILNSLKYVR
gi|372622386|re   DYTQLNELQTKYPRRLVVLGFPCNQFGYQENCKNEEILNSLKYVR

cons              **:**:****:**:**.**.************:************


JH126660.1        PGNGFKPNFSIFQKCDVNGANTHPVFAYLKEKLPVPDDDPTSFMT
gi|372622386|re   PGKGFVPGFTLFQKCDVNGKDTHSVFAYLKDKLPVPDNEPAALIS

cons              **:** *.*::******** :**.******:******::*:::::


JH126660.1        DPKFIIWSPINRSDIAWNFEKFLIGPEGETFKRYSKKFQTISIEP
gi|372622386|re   DPRYIVWNPVHRSDISWNFEKFLIGPEGEPFKRYNKNFQTISIEP

cons              **::*:*.*::****:*************.****.*:********


JH126660.1        DIQRLLKLAK
gi|372622386|re   DIQRLLKLTK

cons              ********:*