T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
gi|56269442|gb|   :  99
JH129826.1        :  99
cons              :  99

gi|56269442|gb|   MQALWPLLLSALPALLGASSLFVEKESNGSRICKPAPQWEIDGKT
JH129826.1        -----------------------------STRCKEPPTWYIGEEN

cons                                           *  ** .* * *. :.


gi|56269442|gb|   PMKELLGNVVVVALLKASXHFCLTQAARLGDLRDKLANGGLTNIS
JH129826.1        PMLESRGKVTVVALLQAS-HFCLMQASRMDDLHLKLENEGLVNIS

cons              ** *  *:*.*****:** **** **:*:.**: ** * **.***


gi|56269442|gb|   FMVVNEQDSQSRAMYWELKRRTAQDIPVYQQSPLQNDVWEILEGD
JH129826.1        YMIVNHQGEYSQHKHNLLKQRVSEFIPVYKQDMEKPNVWNLLNGN

cons              :*:**.*.. *:  :  **:*.:: ****:*.  : :**::*:*:


gi|56269442|gb|   KDDFLVYDRCGYLTFHIVLPFSFLHYPYIEAAIRATYHKNMCNCS
JH129826.1        KDDFLIYD-------------------------------------

cons              *****:**                                     


gi|56269442|gb|   LNANFSISESPDSTKNEPAGENNQRPNSTEPVTAAHHHHHQQHEP
JH129826.1        ---------------------------------------------

cons                                                           


gi|56269442|gb|   HHHHHNPYPNSHKKSGDSDVTGKPKEPTHHSHQEHVHNHR
JH129826.1        ---------------------------------------R

cons                                                     *