T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=97
*
 BAD AVG GOOD
*
JH126619.1        :  97
gi|168823481|re   :  97
cons              :  97

JH126619.1        ---------------------------VGNLFSDYGWYILFGCAA
gi|168823481|re   MEAEDGARVRNEDVPPQNQDLSFLQPSVTAFMSEYGWYLLFGCVG

cons                                         *  ::*:****:****..


JH126619.1        VLLFIQKFRGRMGALVQRRSDSSQVTVDPTLVVKQQEALEASRRR
gi|168823481|re   VYLLIQHLRKSRSSTQTRSSSGSAEAHDVGSVVRRQEALEASRRR

cons              * *:**::*   .:   * *..*  : *   **::**********


JH126619.1        MQEELDAQAEKYKERQKQLDEEKRRQKIEMWESMQEGKSYKGNAK
gi|168823481|re   MQEEQDARAAEFREKQRMLEEEKRRQKIEMWDSMQEGKSYKGSAK

cons              **** **:* :::*:*: *:***********:**********.**


JH126619.1        LSQQETRESSSSAVPKSKPDKKPLRGGGYSPLSGDGGGTCSWRPG
gi|168823481|re   VAQQNTEEAASSSSLRPKTEKKPLRSSGYSPLSGDAGGSCSWRPG

cons              ::**:*.*::**:  :.*.:*****..********.**:******


JH126619.1        RRGPSSGGG-
gi|168823481|re   RRGPSAGGXG

cons              *****:**