T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
JH126867.1_subs   :  99
gi|194462986|gb   :  99
cons              :  99

JH126867.1_subs   -TASAMAWQNAKSIYDFTARDIDGNEVSLEKYRGFVCIIVNVASK
gi|194462986|gb   MCAQASDWQSAKSIYEFSAIDIDGNDVSLEKYRGYVCIITNVASK

cons                *.*  **.*****:*:* *****:********:****.*****


JH126867.1_subs   XGKTAVNYTQFVKMHAKYAESGLRILGFPSNQFGKQEPGTEQEIK
gi|194462986|gb   UGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQEPGSEAEIK

cons               ***.*****:. **..***.********.*********:* ***


JH126867.1_subs   EFTKTFNVEFDLFSKIDVNGENAHPLWKWMKEQPKGKGTLGNAIK
gi|194462986|gb   EFAKGYNAEFDLFSKIDVNGDAAHPLWKWMKEQPKGRGTLGNNIK

cons              **:* :*.************: **************:***** **


JH126867.1_subs   WNFTKFLTNREGQVVKRYGPMDNPEVIEKDLKDYL
gi|194462986|gb   WNFTKFLIDREGQVVKRYGPMDDPSVVEKDLPKYL

cons              ******* :*************:*.*:**** .**