SelX

1. Fastatranslate:

>JH127454.1 dna:scaffold scaffold:LatCha1:JH127454.1:1:880396:1 REF:[translate(1)] (1)]

MSFCSFFGGEVYADHFEPGIYVCSKCGYELFSSRSKYQHSSPWPAFTETIHKDSVLKKAEQSHHAYKISC GKCRNGLGHEFLNDGPSMGQSRFUVFSSSLKFVPKGGECLV

2. SECISearch: 1 hit

Pattern: Loose

1 JH127454.1:subseq(612519 15000) dna:scaffold scaffold:LatCha1:JH127454.1:1:880396:1 REF: 3029 2929 (SECIS on complementary strand) upstemen: -4.60 fullstructen: -14.78

AUUGGCUCUC UAUCAGG UGUUAACGAGCUG CUGAA UGAGGAUAAAC AA GUGCACAAAACGCA GGUGCUUCAUG GGAU ACCCAAAA CCAGGG AUUUUUAAA

COVE score: 0 (Recommended threshold for COVE: 15)