SelS
1. Fastatranslate:
>JH126619.1 dna:scaffold scaffold:LatCha1:JH126619.1:1:3103051:1 REF:[translate(1)
VGNLFSDYGWYILFGCAAVLLFIQKFRGRMGALVQRRSDSSQDPTLVVKQQEALEASRRRMQEELDAQAE
KYKERQKQLDEEKRRQKIEMWESMQEGKSYKGNAKLSQTGYSPLSGDGGGTCSWRPGRRGPSSGGUG
2. SECISearch: 1 hit
Pattern: Loose
1 JH126619.1:subseq(2896882 15000) dna:scaffold scaffold:LatCha1:JH126619.1:1:3103051:1 REF: 7038 6932 (SECIS on complementary strand)
upstemen: -5.86 fullstructen: -13.62
GGUUUCUCUU UUGUAAA UUUGACAGUACCU CUGAA UGAGGACUUAUU CC UGUUUCUUUUUCAUUCCCUAGCC AGGGUCUCCUCU GGAU UUA UUGUGG GGAAAUGGAA
COVE score: 0
(Recommended threshold for COVE: 15)