GPx1
1. Fastatranslate:
>JH126695.1 dna:scaffold scaffold:LatCha1:JH126695.1:1:2347075:1 REF:[translate(1)]
MA*VSLPKTICEVGWVSASPPHLGGL*KRAASPPPLVLRACFLKMAVGMKKFYDFSAKILNTGELLSFSK
FKGKVVLLENVASLUGTTTRDYTQMNQLHSKYASQGLVVLGFPCNQFGHQENCKNEEILNSLKHVRPGNG
FEPHFTLLDKCDVNGKDAAPLFTYLKEKLPYPSDDPTSLMTDPKSIIWSPVCRNDISWNFEKFLISSDGE
PYKRYSRKFLTIDIEEDIKKLLPLVK
2. SECISearch: 1 hit
Pattern: Loose (canonical)
JH126695.1:subseq(1771524 15000) dna:scaffold scaffold:LatCha1:JH126695.1:1:2347075:1 REF: 10254 10157 (SECIS on complementary strand)
UAGCAAAAGC AUUAAAU GGG AUGAA GGUUCAAGUCUG AA ACCUGGGUUUUCUUAUAGAUAG CAGACUUUCAUU UGAG CACC AUAUACA AAACAUUGUA
COVE score: 1.86
(Recommended threshold for COVE: 15)