
genewise output
Score 14.77 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|169403976|re   81 EEILQSLKYVRP                                      
                     EE+ + +K VRP                                      
                     EELKRDVKVVRP                                      
GeneScaffold_12 2864 ggtaaggaggcc                                      
                     aatagatattgc                                      
                     ggaagttaggcg                                      


//
>GeneScaffold_1266:subseq(476517,11900).pep
EELKRDVKVVRP
//
>GeneScaffold_1266:subseq(476517,11900).[2864:2899].sp
GAGGAGTTAAAAAGGGATGTTAAAGTGGTGCGCCCG
//
GeneScaffold_1266:subseq(476517,11900)	GeneWise	match	2864	2899	14.77	+	.	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
GeneScaffold_1266:subseq(476517,11900)	GeneWise	cds	2864	2899	0.00	+	0	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
//

genewise output
Score 264.58 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|169403976|re    6 KKFYDLSAKLLSGDLLNFSSLKGKVVLIENVASLXGTTVRDYTQMNELH 
                     K FYDL A  L G  ++F+  +G+VVLIENVASLXGTT RDY+++++L  
                     KTFYDLKATTLEGATVDFNVFRGRVVLIENVASLXGTTTRDYSELSQLQ 
GeneScaffold_12 -680 aattgcagaacgggaggtagtagcggcagaggtctgaaacgtagcaccc 
                     actaataccctagcctatattgggttttaatcctggcccgaagatgata 
                     gccccggccggggcggcccgcgccgtgcacgcgcaccccgcccgccggg 


gi|169403976|re   55 SRYADQGLVVLGAPCNQFGHQ                       ENCKN 
                     S+Y  + LVVLG PCNQFG+Q                       EN  N 
                     SKYPHR-LVVLGFPCNQFGYQ                       ENLSN 
GeneScaffold_12 -533 aatccc cggcgtctactgtcGTGAGTT  Intron 1   CAGgatta 
                     gaacag ttttgtcgaatgaa<0-----[473  :  348]-0>aatca 
                     cgcccg cgcgccctcgtccg                       gcgtt 


gi|169403976|re   81 EEILQSLKYVRPGNGFEPKFQILEKLEVNGENAHPLFAFLKEKLPQPSD 
                      EIL SLKYVRPG G+EP F + EK EVNG N HP+FA+LK+KLP P D 
                     GEILNSLKYVRPGAGYEPGFTVFEKCEVNGANPHPVFAYLKDKLPYPED 
GeneScaffold_12 -332 ggatatcatgccgggtgcgtagtgatggaggacccgtgtcagacctcgg 
                     gattactaatgcgcgaacgtcttaagatagcacacttcataaatcacaa 
                     ggcatgggtgaacgccaccccctggcaccagcacgcccccacggcccac 


gi|169403976|re  130 DPVSLMGDPKFIIWSPVCRNDISWNFEKFLIGPDGEPFKRYSRRFLTID 
                     DP SLM DPK +IW+P+CRND+SWNFEKFL+GP+GEPFKRYS++F TI  
                     DPNSLMQDPKHLIWTPICRNDVSWNFEKFLVGPEGEPFKRYSKKFPTIS 
GeneScaffold_12 -185 gcatcacgcaccatacatcaggttatgatcggcgggctaataaatcaaa 
                     acacttaacaattgcctggaatcgataatttgcagactagagaatcctg 
                     cccccggccgcgcggcacgccccgctggcgcgggagctgaccggccccc 


gi|169403976|re  179 IDADIKELLKRT                                      
                     I+ DI+ LL+ T                                      
                     IEPDIQRLLRLT                                      
GeneScaffold_12  -38 agcgacactata                                      
                     tacatagttgtc                                      
                     agcctgagggac                                      


//
>GeneScaffold_1266:subseq(476517,11900).pep
KTFYDLKATTLEGATVDFNVFRGRVVLIENVASLXGTTTRDYSELSQLQSKYPHRLVVLG
FPCNQFGYQENLSNGEILNSLKYVRPGAGYEPGFTVFEKCEVNGANPHPVFAYLKDKLPY
PEDDPNSLMQDPKHLIWTPICRNDVSWNFEKFLVGPEGEPFKRYSKKFPTISIEPDIQRL
LRLT
//
>GeneScaffold_1266:subseq(476517,11900).[680:1].sp
AAGACCTTCTACGACCTGAAGGCCACCACGCTGGAGGGGGCCACGGTGGACTTCAACGTG
TTCAGGGGCCGCGTGGTTCTGATCGAAAACGTGGCCTCGCTCTGAGGCACCACCACCCGG
GACTACAGCGAGCTCAGCCAGCTGCAGAGCAAGTACCCCCACCGGCTCGTGGTCCTGGGC
TTCCCCTGTAACCAGTTTGGCTACCAGGAGAACTTGTCTAATGGGGAGATCTTAAATTCG
CTGAAGTATGTGCGACCAGGCGCGGGCTACGAACCCGGCTTCACCGTCTTTGAGAAGTGC
GAAGTCAACGGAGCGAACCCACACCCGGTCTTCGCCTACCTCAAAGACAAGCTGCCCTAC
CCCGAAGACGACCCCAACTCCCTCATGCAGGACCCCAAGCACCTGATCTGGACGCCCATA
TGCCGGAACGACGTCTCCTGGAACTTTGAGAAGTTCCTGGTCGGGCCGGAGGGAGAGCCC
TTTAAGAGATACAGCAAGAAGTTCCCCACCATCAGCATAGAGCCCGACATTCAGAGACTG
TTGAGGTTAACC
//
GeneScaffold_1266:subseq(476517,11900)	GeneWise	match	680	3	264.58	-	.	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
GeneScaffold_1266:subseq(476517,11900)	GeneWise	cds	680	474	0.00	-	0	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
GeneScaffold_1266:subseq(476517,11900)	GeneWise	intron	473	348	0.00	-	.	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
GeneScaffold_1266:subseq(476517,11900)	GeneWise	cds	347	3	0.00	-	0	GeneScaffold_1266:subseq(476517,11900)-genewise-prediction-1
//
