
genewise output
Score 500.15 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|209954618|re    2 MNTIKSIKNALVFFVLLPRFLVAAVMFWLLDFLCIRKRVFFRMKEQED- 
                     MNT+K+IKNA+V +VLLPRFLVAAV+FWLLDFLCIRKRVFFRM+  E+  
                     MNTVKAIKNAIVCLVLLPRFLVAAVLFWLLDFLCIRKRVFFRMRPHEEG 
GeneScaffold_4410000 aaagagaaagagtcgtccctcggggcttccgtctaaaagttaaaccggg 
                     tactactaacttgttttcgtttcctttgttattgtgagtttgtgcaaag 
                     gctcattataagtttgttctcggcggtgggctgccaaggtcgggacaga 


gi|209954618|re   50 DAVDPPLCISDSNRLFTVESLKAVWHGHKLDFLKAAHLGQGAPNTEVVQ 
                     DA+DPPLCISDSNRL T+ESLKAVWHGHKLDFLKAA LG GAPNTEVVQ 
                     DAIDPPLCISDSNRLCTLESLKAVWHGHKLDFLKAARLGCGAPNTEVVQ 
GeneScaffold_4410147 ggagccctatgtacttacgtcaggtcgcacgttaggccgtggcaagggc 
                     actacctgtcacagtgctactactgagaatattaccgtgggccacatta 
                     tcaccggccccccagccggctggggcgcggctaatgtcacagcccgggg 


gi|209954618|re   99 LEDQRRSRILDYAKDKRPLILNFGSCTXPPFMARLKAFQGVVEQNADIA 
                     L DQ+RSR+LDYA+  RPLILNFGSCTXPPFMARLKAF G+V+Q+ D+A 
                     LRDQKRSRVLDYAQGDRPLILNFGSCTXPPFMARLKAFHGLVQQHEDVA 
GeneScaffold_4410294 ccgcacacgcgtgcggcccacatgatatcctagccagtcgcgcccgggg 
                     tgaaagggttaacagagctttatgggcgccttcgtactagttaaaaatc 
                     gccggccctctcggccggcctccccccaggtggccggccccagacgcag 


gi|209954618|re  148 DSVVVYIEEAHPSDGWVSTDAPYQIPKHRCLADRLGAAQLMRLEVPGCL 
                     D +VVYIEEAHPSDGWVS+DAPYQIPKHRCL DRL AAQLMRLEVPGC  
                     DYLVVYIEEAHPSDGWVSSDAPYQIPKHRCLEDRLSAAQLMRLEVPGCA 
GeneScaffold_4410441 gttggtagggcctggtgatggctcacacctcggccaggccaccggcgtg 
                     aatttataacaccaggtgcaccaatcaaggtaagtgccattgtatcggc 
                     ccgggtcaagccgcgggcccgacgccgccttgcggcaagggcggccgcg 


gi|209954618|re  197 IVVDSMENSSNVAYGAYFDRLYILQEGKIVYQGGRGPEGYRITELRDWL 
                     +VVD+MEN++N AYGAYFDRLYIL +GKIVYQGGRGPEGYRI+ELRDWL 
                     VVVDNMENATNAAYGAYFDRLYILHDGKIVYQGGRGPEGYRISELRDWL 
GeneScaffold_4410588 ggggaagagaaggtggttgactaccggaagtcggagcggtcatgcagtc 
                     tttaataaccaccagcatagtattaagattaaggggcagagtcatgagt 
                     gggccggcgcccgcaattcatcatcttaagcgctgtggtcgctgaacgt 


gi|209954618|re  246 VEYRESL                                           
                       YR++L                                           
                     NHYRQTL                                           
GeneScaffold_4410735 actacac                                           
                     aaagact                                           
                     tccaaag                                           


//
>GeneScaffold_4497:subseq(8592,21000).pep
MNTVKAIKNAIVCLVLLPRFLVAAVLFWLLDFLCIRKRVFFRMRPHEEGDAIDPPLCISD
SNRLCTLESLKAVWHGHKLDFLKAARLGCGAPNTEVVQLRDQKRSRVLDYAQGDRPLILN
FGSCTXPPFMARLKAFHGLVQQHEDVADYLVVYIEEAHPSDGWVSSDAPYQIPKHRCLED
RLSAAQLMRLEVPGCAVVVDNMENATNAAYGAYFDRLYILHDGKIVYQGGRGPEGYRISE
LRDWLNHYRQTL
//
>GeneScaffold_4497:subseq(8592,21000).[10000:10755].sp
ATGAACACTGTCAAAGCTATTAAAAATGCAATAGTGTGTCTTGTTTTGCTTCCTCGCTTT
CTCGTGGCGGCCGTGCTGTTTTGGCTGCTGGACTTTCTGTGCATCAGAAAAAGGGTGTTT
TTCAGGATGAGGCCACACGAAGAGGGAGATGCCATAGACCCCCCGCTGTGCATCTCCGAC
TCCAACCGATTGTGCACCCTGGAGTCCCTTAAGGCGGTGTGGCACGGGCACAAGCTGGAC
TTTTTAAAAGCTGCGCGTCTCGGATGCGGAGCGCCCAACACCGAGGTGGTGCAGCTGCGC
GACCAGAAGCGCAGCCGCGTTCTCGATTACGCGCAGGGCGACCGGCCGCTCATCCTTAAC
TTCGGCAGCTGCACCTGACCGCCGTTTATGGCGCGCCTCAAGGCGTTCCACGGCCTCGTA
CAGCAACACGAGGACGTAGCGGACTACTTGGTGGTGTATATCGAAGAAGCGCACCCCTCG
GACGGGTGGGTGAGCTCCGACGCGCCATACCAGATCCCCAAGCACCGCTGTCTTGAGGAC
CGGCTGAGCGCAGCACAGCTGATGCGCCTGGAGGTCCCCGGGTGCGCGGTGGTGGTGGAC
AACATGGAGAACGCGACCAACGCCGCGTACGGAGCATATTTTGACAGACTTTACATACTT
CACGATGGTAAAATAGTGTACCAGGGCGGTAGGGGTCCGGAGGGTTACCGGATCTCTGAG
CTAAGAGACTGGCTTAATCACTACAGACAAACACTG
//
GeneScaffold_4497:subseq(8592,21000)	GeneWise	match	10000	10755	500.15	+	.	GeneScaffold_4497:subseq(8592,21000)-genewise-prediction-1
GeneScaffold_4497:subseq(8592,21000)	GeneWise	cds	10000	10755	0.00	+	0	GeneScaffold_4497:subseq(8592,21000)-genewise-prediction-1
//

genewise output
Score 17.44 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|209954618|re    9 KNALVFFVLLPRFLVAAVMFWLLDFLCI                      
                     +N  VFF+LL  +L+  +++ LL +L +                      
                     QNMYVFFLLLLLLLLLLLLLLLLLLLLL                      
GeneScaffold_44-7353 caatgttccccccccccccccccccccc                      
                     aatatttttttttttttttttttttttt                      
                     acgtatttcttttttttttttttttttt                      


//
>GeneScaffold_4497:subseq(8592,21000).pep
QNMYVFFLLLLLLLLLLLLLLLLLLLLL
//
>GeneScaffold_4497:subseq(8592,21000).[7353:7268].sp
CAAAACATGTATGTATTTTTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTT
//
GeneScaffold_4497:subseq(8592,21000)	GeneWise	match	7353	7270	17.44	-	.	GeneScaffold_4497:subseq(8592,21000)-genewise-prediction-1
GeneScaffold_4497:subseq(8592,21000)	GeneWise	cds	7353	7270	0.00	-	0	GeneScaffold_4497:subseq(8592,21000)-genewise-prediction-1
//
