
genewise output
Score 437.53 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|364502958|re    6 GSAGVQSALKNAAVCVLLLPRFLLAALMLCLLDFLCIRRKLLLKMQEGA 
                     GS  +  ALK+AA+C++LLPRFLLAA+ML +LDFLCIR+K+LL+M +G  
                     GSVQMALALKHAALCLMLLPRFLLAAVMLWILDFLCIRKKVLLRMGQGE 
contig121407      40 gagcagcgcacggctcacccctccgggactatgtctacaagccaagcgg 
                     ggtatctctaacctgttttcgtttcctttgttattgtgaatttgtgaga 
                     ctcaggggggccggcgggggccggcacgggcgtcgcccaagggggcgtg 


gi|364502958|re   55 FSSPDDPPLRVSDSNKMFTLESLRAVWYGQKLDFFKSARLGGAAPNTEV 
                        PDDPP+ VSDSNKMFTLESLRAVWYGQKLDFFK+A +G +APNTEV 
                     -GGPDDPPVCVSDSNKMFTLESLRAVWYGQKLDFFKAAHVGHSAPNTEV 
contig121407     187  ggcggccgtgtgtaaatacgtccggttgcacgttaggcggcagcaagg 
                      ggcaacctgtcacaattctactgctgagaatattaccatgagccacat 
                      ccgccgggccgcccggccggggccggcggagctcaggctcccgcccgg 


gi|364502958|re  104 FPLDGDARAAERILDYARGRRPLILNFGSCSXPPFMTRLSAFQRVARQY 
                       +    R   RILD  RG+RPLILNFGSCSXPPFMTRL+AF+RVA QY 
                     VAVQD--RQTLRILDCMRGKRPLILNFGSCSXPPFMTRLAAFRRVASQY 
contig121407     331 gggcg  ccaccacgtacgaaccacatgatttcctaaccggtccggact 
                     tctaa  gactgttagtggagctttatgggcgccttcgtcctggtcgaa 
                     ggggc  cgcgccgccggcgggctgctccccaggcggcgcgcgcggcgc 


gi|364502958|re  153 ADIADSLLVYIEEAHPSDGWVSSDAPVQIPRHRCLEDRLRAAQMLHREA 
                     ADIADSLLVYIEEAHPSDGWVSSDAP QIP+HRC+EDRLRAAQ++  E  
                     ADIADSLLVYIEEAHPSDGWVSSDAPYQIPKHRCIEDRLRAAQLMLSEV 
contig121407     472 ggaggtccgtagggcctggtgatggctcacacctaggcccggccactgg 
                     catcactttataacaccaggtgcaccaatcaaggtaagtgccatttcat 
                     gccgcggcgccgggtgcccggcccggcgccgccccgcgccggggggcgg 


gi|364502958|re  202 AGSAVVVDSMQNSCNAAYGAYFERLYIVKDATVVYQGGRGPEGYRIAEL 
                      GS VV+D+M NS NAAYGAYFERLYI++D  VVYQGGRGPEGYRI+EL 
                     PGSQVVIDTMDNSSNAAYGAYFERLYILRDQRVVYQGGRGPEGYRISEL 
contig121407     619 cgacggagaagattaggtggttgactatagccggtcggcgcggtcatgc 
                     cggatttactaaccaccagcatagtattgaagttaaggggcagagtcat 
                     gccgggctcgccgccggcccctgatccggcgtgccgccgtcggccaggc 


gi|364502958|re  251 RDWLERYRSGLQES--AVLHV                             
                     RDWLE+YR  L  S  AVLHV                             
                     RDWLEQYRHDLVSSKTAVLHV                             
contig121407     766 agtcgctccgcgataaggccg                             
                     gagtaaagaattgcaccttat                             
                     atgggacgctcgtcaatgctt                             


//
>contig121407.pep
GSVQMALALKHAALCLMLLPRFLLAAVMLWILDFLCIRKKVLLRMGQGEGGPDDPPVCVS
DSNKMFTLESLRAVWYGQKLDFFKAAHVGHSAPNTEVVAVQDRQTLRILDCMRGKRPLIL
NFGSCSXPPFMTRLAAFRRVASQYADIADSLLVYIEEAHPSDGWVSSDAPYQIPKHRCIE
DRLRAAQLMLSEVPGSQVVIDTMDNSSNAAYGAYFERLYILRDQRVVYQGGRGPEGYRIS
ELRDWLEQYRHDLVSSKTAVLHV
//
>contig121407.[40:828].sp
GGCAGTGTCCAAATGGCGCTGGCGCTGAAGCACGCCGCGCTGTGCCTGATGCTGCTGCCG
CGCTTCCTGCTGGCCGCAGTCATGCTGTGGATCTTGGATTTCCTGTGCATCCGCAAAAAA
GTGCTGCTGAGGATGGGCCAGGGTGAGGGCGGCCCGGACGACCCGCCGGTGTGCGTCTCG
GACTCCAACAAGATGTTCACCCTGGAGTCGCTGCGCGCCGTGTGGTACGGGCAGAAACTG
GACTTTTTCAAAGCGGCGCACGTTGGCCACAGCGCGCCCAACACCGAGGTGGTGGCGGTG
CAGGACCGCCAGACCCTGCGCATCCTGGACTGCATGCGGGGCAAGAGGCCGCTCATTCTG
AACTTTGGCAGCTGCTCCTGACCGCCGTTCATGACGCGCCTGGCCGCGTTCCGGCGCGTG
GCGAGCCAGTACGCGGACATCGCGGACTCGCTGCTCGTGTACATCGAGGAGGCGCATCCG
TCCGACGGCTGGGTGAGCTCCGACGCGCCGTACCAGATCCCCAAGCACCGCTGCATCGAG
GACCGGCTCCGCGCGGCGCAGCTGATGCTGTCCGAGGTGCCGGGCAGCCAGGTGGTGATC
GATACCATGGACAACTCGTCCAACGCGGCGTACGGCGCCTACTTTGAGAGACTTTACATC
TTGAGGGACCAGCGTGTGGTCTACCAGGGCGGCCGGGGTCCCGAGGGGTACCGCATATCG
GAGCTCAGAGATTGGCTGGAGCAATACCGGCACGATCTCGTGAGTTCCAAAACAGCTGTG
CTCCATGTT
//
contig121407	GeneWise	match	40	828	439.53	+	.	contig121407-genewise-prediction-1
contig121407	GeneWise	cds	40	828	0.00	+	0	contig121407-genewise-prediction-1
//

genewise output
Score 18.28 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|364502958|re  166 AHPSDGWVSSDAPVQIPRHRCLEDRLRAAQMLHR                
                     AHP   + +    +Q P+H C +   R   +  R                
                     AHPQQHFFADAQEIQDPQHDCGQQEARQQHQAQR                
contig121407    -177 gcccccttgggcgacgcccgtgccggcccccgcc                
                     cacaaattcacaataacaaaggaaacgaaaacag                
                     cttggcttgtagacatagtcccggaggggtgagc                


//
>contig121407.pep
AHPQQHFFADAQEIQDPQHDCGQQEARQQHQAQR
//
>contig121407.[177:74].sp
GCCCATCCTCAGCAGCACTTTTTTGCGGATGCACAGGAAATCCAAGATCCACAGCATGAC
TGCGGCCAGCAGGAAGCGCGGCAGCAGCATCAGGCACAGCGC
//
contig121407	GeneWise	match	177	76	18.28	-	.	contig121407-genewise-prediction-1
contig121407	GeneWise	cds	177	76	0.00	-	0	contig121407-genewise-prediction-1
//
