T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=96
*
 BAD AVG GOOD
*
JH209284.1_subs   :  96
gi|270281942|gb   :  96
cons              :  96

JH209284.1_subs   A-VPLPQQLTKFRGRDKTMCPVHGFSTRAGGWSQFFKCRLLGFDA
gi|270281942|gb   LLHPLPQRAAAVRGAERRMCAQADEWRSATSMYDFHARDIDGHDV

cons                 ****: : .** :: **.  .    * .  :*.   : *.*.


JH209284.1_subs   SFERLRGLVCIIVNVASKUGKTAVNYTQLVDMYARLAERGLRILG
gi|270281942|gb   ALERYRGFVCIVTNVASKUGKTAVNYTQLVDLHARYAEKGLRILA

cons              ::** **:***:.******************::** **:*****.


JH209284.1_subs   FPCNQFGKQEPGDESQIKQFVASYGVKFDMFSKIEVNGNNAHPLW
gi|270281942|gb   FPCNQFGKQEPGDEAQIKAFAEGYGVKFDMFSKIEVNGDGAHPLW

cons              **************:*** *. .***************:.*****


JH209284.1_subs   KWMKEQPKGRGLLGNAIKWNFTKFLIDREGQVVKRYSPMEDPYLI
gi|270281942|gb   KWMKEQPKGRGTLGNAIKWNFTKFLINREGQVVKRYSPMEDPSVI

cons              *********** **************:*************** :*


JH209284.1_subs   EKDLPNYL
gi|270281942|gb   EKDLPAYL

cons              ***** **