T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
JH224652.1_subs   :  99
gi|212549567|re   :  99
cons              :  99

JH224652.1_subs   MGGGFRASWIFPLVLAGFIQPNQGQEKQKVDCYNSVEGTIYNYGA
gi|212549567|re   MTPQFWASCLFSLCLVGFAQLIPKEQKMKMDCYKGVTGTIYEYGA

cons              *   * ** :*.* *.** *    ::* *:***:.* ****:***


JH224652.1_subs   VTIDGREYVPFRKYKGKMILFVNVATYUGLTLQYLELNALHTELA
gi|212549567|re   LTLNGEEYIPFKQYAGKHVLFVNVATYUGLTAQYPELNALQEELK

cons              :*::*.**:**::* ** :************ ** *****: ** 


JH224652.1_subs   PYGLTVLGFPSNQFGKQEPGENDEILPALKYVRPGGGFVPNFQLF
gi|212549567|re   PFGVVVLGFPCNQFGKQEPAKNSEILLGLKYVRPGGGFVPNFQLF

cons              *:*:.*****.********.:*.*** .*****************


JH224652.1_subs   QKGDGNGEKEQKFYTFLKNSCPPVVESFGDPKRLFWEPLKVHDIK
gi|212549567|re   EKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSNQLFWEPMKVHDIR

cons              :*** *******.:*********. : :*..::*****:*****:


JH224652.1_subs   WNFEKFLVGPTGQPVMRWSPRTNMAAVKNDIVDYMR----R
gi|212549567|re   WNFEKFLVGPDGVPVMRWYHRASVSTVKSDIMEYLKQFKSE

cons              ********** * *****  *:.:::**.**::*::    .