T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=100
*
 BAD AVG GOOD
*
JH206811.1_subs   : 100
gi|182702123|sp   : 100
cons              : 100

JH206811.1_subs   MGLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLLLSRSK
gi|182702123|sp   MGLLSADLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSK

cons              *****.*********************************:*****


JH206811.1_subs   AARGEWRRMLTSEGLRCVWNSFLLDAYKQVKLGGEAPNSNVIHVA
gi|182702123|sp   SARGEWRRMLTSEGLRCVWNSFLLDAYKQVKLGGEAPNSSVIHIA

cons              :**************************************.***:*


JH206811.1_subs   NGSGGSNSRKKSVGGKYGTKCHLLDFANSERPLVVNFGSATUPPF
gi|182702123|sp   KGNDGSNSSWKSVGGKCGTKCHLLDFANSERPLVVNFGSATUPPF

cons              :*..****  ****** ****************************


JH206811.1_subs   TSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISSFSFE
gi|182702123|sp   TSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFE

cons              ****************************************. ***


JH206811.1_subs   VRKHRNQEDRCAAAQQLLERFSLPSQCQVVADCMDNNANVAYGVS
gi|182702123|sp   VKKHRNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNANVAYGVS

cons              *:************:*********.********************


JH206811.1_subs   FERVCIVQRQKIAYLGGKGPFFYNLQEVRLWLEQNFSKRUNP---
gi|182702123|sp   FERVCIVQRQKIAYLGGKGPFFYNLQEVRLWLEQNFSKRUNPLST

cons              ******************************************   


JH206811.1_subs   ---------
gi|182702123|sp   EDLSTDVSL

cons