T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=96
*
 BAD AVG GOOD
*
gi|157887771|em   :  96
JH208026.1_subs   :  96
cons              :  96

gi|157887771|em   MAPIPDDTSSWVKKTINSSAVLLFSKSRCPYCRAVKQIFNDDKVN
JH208026.1_subs   -----------------------------PQCKVVKELFHSMGID

cons                                           * *:.**::*:.  ::


gi|157887771|em   HAVIELDKRPDGAKIQQVLSQISGISTVPQVFVRGEFVGDSSTIS
JH208026.1_subs   YYALELDLTDDGSNIQQVLADITGQRTVPNVFVNGTHVGGYDTTF

cons              : .:***   **::*****::*:*  ***:***.* .**. .*  


gi|157887771|em   KL-KKEDKLTEVIKKNTYDYDLVVIGGGSGGLAASKEAARFGAKT
JH208026.1_subs   QTUKTNVLGNQADGAEVYDYDLIVVGGGSGGLACSKEAAALGKKV

cons              :  *.:   .:.   :.*****:*:********.***** :* *.


gi|157887771|em   AVFDFVVPTPQDTTRGLGGTCVNVGCIPKKLMHQAALLREGMPDS
JH208026.1_subs   LVLDYVVPTPSGTSWGLGGTCVNVGCIPKKLMHQAALLGQALQDS

cons               *:*:*****..*: *********************** :.: **


gi|157887771|em   VHFGWKWDPEKIEHDWAQIVENIGNHIHSLNWGYRTQLRSINVEY
JH208026.1_subs   RKFGWEYD-EQVKHNWETMVEAVQNYIGSLNWGYRVSLREKTVTY

cons               :***::* *:::*:*  :** : *:* *******..**. .* *


gi|157887771|em   VNAFAEVVDPHTIKYTKKNKETGTVTAKVIILATGERPRYPGIPG
JH208026.1_subs   INAYAEFIDPHKIKATNRKGQETFHTAQTFVLATGERPRYLGIPG

cons              :**:**.:***.** *::: :    **:.::********* ****


gi|157887771|em   DKEYAITSDDLFWLPYPPGKTLVVGASYVALECAGFLTRFGFDTT
JH208026.1_subs   DKEYCITSDDLFSLPYCPGKTLIVGASYVALECAGFLAGIGLDVT

cons              ****.******* *** *****:**************: :*:*.*


gi|157887771|em   VMVRSIFLRGFDQQMADMIGEYMKEHGTKFVRSCVPTAIEEIEAR
JH208026.1_subs   IMVRSILLRGFDQEMAERSGAYMESHGVKFIRKFVPIQLNIHQIE

cons              :*****:******:**:  * **:.**.**:*. **  ::  : .


gi|157887771|em   DKENQKPGLYRVKGKYENGEEFV-GEFNTIVMAIGRDPTWDRKAM
JH208026.1_subs   RLEEGMPGRLKVVAQSTEGTEIVEGEYNTILIAIGRDACTRNIGL

cons                *:  **  :* .:  :* *:* **:***::*****.   . .:


gi|157887771|em   ESVGLKLDK-AKRVICADNEQSSVDSIYAIGDIVSGKPQLTPVAI
JH208026.1_subs   DKIGVKINEKNGKIPVNDEEQTNVPHIYAIGDILDGKLELTPVAI

cons              :.:*:*:::   ::   *:**:.*  *******:.** :******


gi|157887771|em   HAGRYLARRLYAGDIELTDYVNVPTTIFTPIEYGACGLSEEDAIT
JH208026.1_subs   QAGKLLARRLFGGSFIKCDYVNVPTTVFTPLEYGCCGLPEERAIE

cons              :**: *****:.*.:   ********:***:***.***.** ** 


gi|157887771|em   KYGKENIEVYHSHFIPLEWTVPHRPED-GYAKIICLKSDSERVIG
JH208026.1_subs   EYGKDNLEVYHTLFWPLEWTVPSRDNNTCFAKIICNKHDGDRVIG

cons              :***:*:****: * ******* * ::  :***** * *.:****


gi|157887771|em   LHVLGPNAGEMTQGFSVAMKAGATKADFDRTIGIHPTCFEGFTTM
JH208026.1_subs   FHVLGPNAGEITQGFGAAMKCGLTKELLDETIGIHPTCAEVFTTM

cons              :*********:****..***.* **  :*.******** * ****


gi|157887771|em   HVTKDSGASAKVTACUG
JH208026.1_subs   EITKSSGKEITQTGCUG

cons              .:**.** . . *.***