T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=91
*
 BAD AVG GOOD
*
gi|12408011|gb|   :  91
JH207189.1_subs   :  91
cons              :  91

gi|12408011|gb|   MQALWPLLLSALPALLGASSLFVEKESNGSRICKPAPQWEIDGKT
JH207189.1_subs   --------------------------ENKTRICQPAPQWAINGTA

cons                                        .* :***:***** *:*.:


gi|12408011|gb|   PMKELLGNVVVVALLKASUHFCLTQAARLGDLRDKLANGGLTNIS
JH207189.1_subs   PMKRELGRVTVVALLKASUQFCLKQAHSLGGLRAKLSRDGLTDIS

cons              ***. **.*.*********:***.**  **.** **:..***:**


gi|12408011|gb|   FMVVNEQDSQSRAMYWELKRRTAQDIPVYQQSPLQNDVWEILEGD
JH207189.1_subs   YMIVNEKAALSRAMYWQLKRQAPKGVPVYQQELLEPDVWQILDGD

cons              :*:***: : ******:***::.:.:*****. *: ***:**:**


gi|12408011|gb|   KDDFLVYDRCGYLTFHIVLPFSFLHYPYIEAAIRATYHKNMC-NC
JH207189.1_subs   KDDFLIYDRCGRLAFHIPLPYSFLHLRYVESAVRVTHAKDFCGNC

cons              *****:***** *:*** **:****  *:*:*:*.*: *::* **


gi|12408011|gb|   SLNANFSISESSDSTKNDPAGENNQRPNSTEPVTAAHHHHHQQHE
JH207189.1_subs   SFYSNSTQESSHDSAAHRPHDHGAGIHSHPWTTTSAHSHHRDRRQ

cons              *: :* : ..* **: : * ...    . . ..*:** **:::::


gi|12408011|gb|   PHHHHHNPYPNSHKKSGDSDVT-GKPKEPPHHSHQEHVHNHR
JH207189.1_subs   ARHQGQQPEVPPRQEEEEGEVPURDP-CPSTQGHRPHVH--N

cons              .:*: ::*   .:::. :.:*.  .*  *. :.*: ***  .