SELENOPROTEÍNAS DE Meleagris gallopavo
PROTEIN REPORT FOR Thioredoxin reductase 2 (TR2)
| DESCRIPCIÓN | Selenoproteína. 17(-):1061097...1032927 |
| SECISearch | Sin resultados. |
| SELENOPROFILES | Encontrada. Elección: Exonerate. Predicción elemento SECIS (strand:- positions:1030548-1030641) |
| COMENTARIOS | Elección: Exonerate. Aunque Genewise no predice la selenocisteína, sí lo hace Selenoprofiles y nuestra predicción con Exonerate. Hay dos homólogos con cisteína, las SPP00000090 y la SPP00000091, que se corresponden con las TR1 y 2 de Drosophila melanogaster, pero claramente Meleagris gallopavo presenta selenocisteína en esta TR, predecida como TR 2 con nuestro método de elección del mejor SCORE de t_coffee, coincidiendo con la anotación del gen de NCBI. |
1. ALINEAMIENTO MÚLTIPLE DE TODOS LOS HOMÓLOGOS DE SELENODB
2. BEST PAIRWISE ALIGNMENT
4. RESULTADOS DEL Selenoprofiles
ALINEAMIENTO MÚLTIPLE DE TODOS LOS HOMÓLOGOS DE SELENODB
CLUSTAL FORMAT for T-COFFEE Version_7.54, SCORE=74, Nseq=27, Len=829
SPP00000034_1.0 MNG---------------------------------------------------------
SPP00000034_1.0.17.exonerate ED----------------------------------------------------------
SPP00000034_1.0.17.genewise ------------------------------------------------------------
SPP00000035_1.0 MAAMA-VAL----------------RGLG-------------------------------
SPP00000035_1.0.17.exonerate RTEALAAAL---------------VGSS--------------------------------
SPP00000035_1.0.17.genewise ------------------------------------------------------------
SPP00000036_1.0 MGHVH-RL--VSGKR-RMHLTSRPVAST-------------HSPL-ILD-M-CPHLNNGP
SPP00000036_1.0.17.exonerate IGK---------------------------------------------------------
SPP00000036_1.0.17.genewise ------------------------------------------------------------
SPP00000079_1.0 MPVDD-CWLYFPASRGRTFVQTV-W---------------------VAP-T-CPN-----
SPP00000079_1.0.17.exonerate STTQS-NE----------------MKSRR-------------------------------
SPP00000079_1.0.17.genewise ------------------------------------------------------------
SPP00000080_1.0 MAAMV-AAM-VAA-----------LRGPS-------------------------------
SPP00000080_1.0.17.exonerate ------------------------------------------------------------
SPP00000080_1.0.17.genewise ------------------------------------------------------------
SPP00000081_1.0 MSSPP-GR--RA------------------------------------------------
SPP00000081_1.0.17.exonerate IGK---------------------------------------------------------
SPP00000081_1.0.17.genewise ------------------------------------------------------------
SPP00000090_1.0 MNLCN-SRF-SVTF-VRQC-ST-ILTSPSAGIIQNRGSLTTKVPHWISSSLSCA------
SPP00000090_1.0.17.exonerate MQE---------------------------------------------------------
SPP00000090_1.0.17.genewise ------------------------------------------------------------
SPP00000091_1.0 MSTIK-FLR-SS---------------T--------------------------------
SPP00000091_1.0.17.exonerate AQLTM-------------------LNSST-------------------------------
SPP00000091_1.0.17.genewise ------------------------------------------------------------
SPP00000063_1.0 MKSLT-EL--FGCFKRQPR-QQ-EASSP-------------ANPH-V-------------
SPP00000063_1.0.17.exonerate ------------------------------------------------------------
SPP00000063_1.0.17.genewise ------------------------------------------------------------
SPP00000034_1.0 ------------------------------------------------------------
SPP00000034_1.0.17.exonerate ------------------------------------------------------------
SPP00000034_1.0.17.genewise ------------------------------------------------------------
SPP00000035_1.0 -------------------GRFRWRTQAVAG---GV------------------------
SPP00000035_1.0.17.exonerate ------------------------------------------------------------
SPP00000035_1.0.17.genewise ------------------------------------------------------------
SPP00000036_1.0 MTGCGRAGDPISHARGGVGGRGERLPRGFARVVRVASEGSVRRPSGPVPAPQPPAFRFVS
SPP00000036_1.0.17.exonerate ------------------------------------------------------------
SPP00000036_1.0.17.genewise ------------------------------------------------------------
SPP00000079_1.0 ---------------------------------------CCWFPGFLPPVPRPP------
SPP00000079_1.0.17.exonerate -------------------KTMNKRTEELSS---IW------------------------
SPP00000079_1.0.17.genewise ------------------------------------------------------------
SPP00000080_1.0 -------------------RRFRPRTRALTR---GT------------------------
SPP00000080_1.0.17.exonerate ------------------------------------------------------------
SPP00000080_1.0.17.genewise ------------------------------------------------------------
SPP00000081_1.0 ------------------------------------------------------------
SPP00000081_1.0.17.exonerate ------------------------------------------------------------
SPP00000081_1.0.17.genewise ------------------------------------------------------------
SPP00000090_1.0 -------------------HHTFQRTMNLTG-QRGS------------------------
SPP00000090_1.0.17.exonerate ------------------------------------------------------------
SPP00000090_1.0.17.genewise ------------------------------------------------------------
SPP00000091_1.0 -------------------HNA------LRS----S------------------------
SPP00000091_1.0.17.exonerate -------------------H---RATE--QR---IW------------------------
SPP00000091_1.0.17.genewise ------------------------------------------------------------
SPP00000063_1.0 -------------------------SDTLSMGVAASGM---------P------------
SPP00000063_1.0.17.exonerate ------------------------------------------------------------
SPP00000063_1.0.17.genewise ------------------------------------------------------------
SPP00000034_1.0 ------------------------------------------------------------
SPP00000034_1.0.17.exonerate ------------------------------------------------------------
SPP00000034_1.0.17.genewise ------------------------------------------------------------
SPP00000035_1.0 ----------R-------------------------------------------------
SPP00000035_1.0.17.exonerate ------------------------------------------------------------
SPP00000035_1.0.17.genewise ------------------------------------------------------------
SPP00000036_1.0 RPGRARSE---SETLERSPPQSPGPGKAGDAPNRRSGHVRGARVLSPPGRRARLSSPGPS
SPP00000036_1.0.17.exonerate ------------------------------------------------------------
SPP00000036_1.0.17.genewise ------------------------------------------------------------
SPP00000079_1.0 ----HVPR-----VLLR-------------------------------------GPRGAV
SPP00000079_1.0.17.exonerate ----------K-------------------------------------------------
SPP00000079_1.0.17.genewise ------------------------------------------------------------
SPP00000080_1.0 ----------R-------------------------------------------------
SPP00000080_1.0.17.exonerate ------------------------------------------------------------
SPP00000080_1.0.17.genewise ------------------------------------------------------------
SPP00000081_1.0 ----------------------------------------------------RLASPGTS
SPP00000081_1.0.17.exonerate ------------------------------------------------------------
SPP00000081_1.0.17.genewise ------------------------------------------------------------
SPP00000090_1.0 ----RDSTGATGG-------NAPAGSGAGAPPPFQHP-----------------------
SPP00000090_1.0.17.exonerate ------------------------------------------------------------
SPP00000090_1.0.17.genewise ------------------------------------------------------------
SPP00000091_1.0 ----------LG------------------------------------------------
SPP00000091_1.0.17.exonerate ------------------------------------------------------------
SPP00000091_1.0.17.genewise ------------------------------------------------------------
SPP00000063_1.0 ------------------PP----------------------------KRPAPA--ESPT
SPP00000063_1.0.17.exonerate ------------------------------------------------------------
SPP00000063_1.0.17.genewise ------------------------------------------------------------
SPP00000034_1.0 ------------------------------------------------------------
SPP00000034_1.0.17.exonerate ------------------------------------------------------------
SPP00000034_1.0.17.genewise ------------------------------------------------------------
SPP00000035_1.0 ------------------------------------------------------------
SPP00000035_1.0.17.exonerate ------------------------------------------------------------
SPP00000035_1.0.17.genewise ------------------------------------------------------------
SPP00000036_1.0 R-SSE----AREELRRHLVGLIERSRVVIFSKSYCPHSTRVKEL---FSSL------GVE
SPP00000036_1.0.17.exonerate ------------------------------------------------------------
SPP00000036_1.0.17.genewise ------------------------------------------------------------
SPP00000079_1.0 LPASR----PSKTLPSS-------------SQTPCPTDPCICPP---P------------
SPP00000079_1.0.17.exonerate ------------------------------------------------------------
SPP00000079_1.0.17.genewise ------------------------------------------------------------
SPP00000080_1.0 ------------------------------------------------------------
SPP00000080_1.0.17.exonerate ------------------------------------------------------------
SPP00000080_1.0.17.genewise ------------------------------------------------------------
SPP00000081_1.0 RPSSE----AREELRRRLRDLIEGNRVMIFSKSYCPHSTRVKEL---FSSL------GVV
SPP00000081_1.0.17.exonerate ------------------------------------------------------------
SPP00000081_1.0.17.genewise ------------------------------------------------------------
SPP00000090_1.0 ------------------------------------------------------------
SPP00000090_1.0.17.exonerate ------------------------------------------------------------
SPP00000090_1.0.17.genewise ------------------------------------------------------------
SPP00000091_1.0 ------------------------------------------------------------
SPP00000091_1.0.17.exonerate ------------------------------------------------------------
SPP00000091_1.0.17.genewise ------------------------------------------------------------
SPP00000063_1.0 LPGETLVDAPGIPLKEALKE-AANSKIVIFYNSSDEEKQ-LVEFETYLNSLKEPADAEKP
SPP00000063_1.0.17.exonerate ------------------------------------------------------------
SPP00000063_1.0.17.genewise ------------------------------------------------------------
SPP00000034_1.0 ------------------------------------------------------------
SPP00000034_1.0.17.exonerate ------------------------------------------------------------
SPP00000034_1.0.17.genewise ------------------------------------------------------------
SPP00000035_1.0 ----------------------------------------------------GA------
SPP00000035_1.0.17.exonerate ------------------------------------------------------------
SPP00000035_1.0.17.genewise ------------------------------------------------------------
SPP00000036_1.0 CNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQK-----
SPP00000036_1.0.17.exonerate ------------------------------------------------------------
SPP00000036_1.0.17.genewise ------------------------------------------------------------
SPP00000079_1.0 -------------STPDSRQEKNTQSELPN------------------KKGQLQKLPTMN
SPP00000079_1.0.17.exonerate ----------------------------------------------------ER------
SPP00000079_1.0.17.genewise ------------------------------------------------------------
SPP00000080_1.0 ----------------------------------------------------GA------
SPP00000080_1.0.17.exonerate ------------------------------------------------------------
SPP00000080_1.0.17.genewise ------------------------------------------------------------
SPP00000081_1.0 YNILELDQVDDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQK-----
SPP00000081_1.0.17.exonerate ------------------------------------------------------------
SPP00000081_1.0.17.genewise ------------------------------------------------------------
SPP00000090_1.0 ---------------------------------------HCDRA--AMYAQPVR------
SPP00000090_1.0.17.exonerate ------------------------------------------------------------
SPP00000090_1.0.17.genewise ------------------------------------------------------------
SPP00000091_1.0 ----------------------------------------------------WC------
SPP00000091_1.0.17.exonerate -----------------------------------------------------W------
SPP00000091_1.0.17.genewise ------------------------------------------------------------
SPP00000063_1.0 LEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLK-ELKALK---------QD
SPP00000063_1.0.17.exonerate ------------------------------------------------------------
SPP00000063_1.0.17.genewise ------------------------------------------------------------
SPP00000034_1.0 -PEDLPKSYDYDLIIIGGGSGGLAAAK---E---AAQYGKKVMVLDFVTPTPL-GTRWGL
SPP00000034_1.0.17.exonerate ----LPMRKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000034_1.0.17.genewise -PPNFSTGKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000035_1.0 ARGAAAGQRDYDLLVVGGGSGGLACAK---E---AAQLGRKVAVVDYVEPSPQ-GTRWGL
SPP00000035_1.0.17.exonerate -QGRWVGRKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000035_1.0.17.genewise --------KEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000036_1.0 -LLQEDLAYDYDLIIIGGGSGGLSCAK---E---AAILGKKVMVLDFVVPSPQ-GTSWGL
SPP00000036_1.0.17.exonerate -FLPHSSGKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000036_1.0.17.genewise ---------EYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000079_1.0 GSKDPPGSYDFDLIIIGGGSGGLAAAKARLS---AAKFDKKVLVLDFVTPTPL-GTRWGL
SPP00000079_1.0.17.exonerate RKKKQPRGKEYDLLVIGGGSGGLACAK---EXFKAAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000079_1.0.17.genewise ---------EYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000080_1.0 A-SAAGGRQSFDLLVIGGGSGGLACAK---E---AAQLGKKVAVADYVEPSPR-GTKWGL
SPP00000080_1.0.17.exonerate --------KEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000080_1.0.17.genewise --------KEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000081_1.0 -LLQDDSAHDYDLIIIGGGSGGLSCAK---E---AANLGKKVMVLDFVVPSPQ-GTTWGL
SPP00000081_1.0.17.exonerate -FLPHSSGKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000081_1.0.17.genewise ---------EYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000090_1.0 KMSTKGGSYDYDLIVIGGGSAGLACAK---E---AVLNGARVACLDFVKPTPTLGTKWGV
SPP00000090_1.0.17.exonerate -PQNKGSGKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000090_1.0.17.genewise ---------EYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000091_1.0 RLAASRPRYDYDLVVLGGGSAGLACAK---E---AAGCGARVLCFDYVKPTPV-GTKWGI
SPP00000091_1.0.17.exonerate CAFFVALPKEYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000091_1.0.17.genewise ---------EYDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000063_1.0 YLKEWLRDHTYDLIVIGGGSGGLAAAK---E---ASRLGKKVACLDFVKPSPQ-GTSWGL
SPP00000063_1.0.17.exonerate ----------YDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
SPP00000063_1.0.17.genewise ----------YDLLVIGGGSGGLACAK---E---AAQFGKKVAVLDYVEPSPR-GTKWGL
:**:::****.**:.** . * . :* *:* *:* ** **:
SPP00000034_1.0 GGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE--E-TVKHDWDRMIEAVQNHIGSL
SPP00000034_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000034_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000035_1.0 GGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVA--Q-PVPHDWRKMAEAVQNHVKSL
SPP00000035_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000035_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000036_1.0 GGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYN--Q-QVRHNWETMTKAIQNHISSL
SPP00000036_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000036_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000079_1.0 GGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVE--D-TVKHDWEKMTESVQSHIGSL
SPP00000079_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000079_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000080_1.0 GGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA--Q-PVQHNWKTMAEAVQNHVKSL
SPP00000080_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000080_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000081_1.0 GGTCVNVGCIPKKLMHQAALLGHALQDAKKYGWEYN--Q-QVKHNWEAMTEAIQSHIGSL
SPP00000081_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000081_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000090_1.0 GGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVD--E-KIKPDWHKLVQSVQNHIKSV
SPP00000090_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000090_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000091_1.0 GGTCVNVGCIPKKLMHQASLLGEAVHEAVAYGWNVD--DTNIRPDWRKLVRSVQNHIKSV
SPP00000091_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000091_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWMISCFH-SLPCDRSVMAQAVQNYVKSL
SPP00000063_1.0 GGTCVNVGCIPKKLMHQASLLGHSIHDAKKYGWKLP--EGKVEHQWNHLRDSVQDHIASL
SPP00000063_1.0.17.exonerate GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
SPP00000063_1.0.17.genewise GGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMA--H-PVHHSWSVMAQAVQNYVKSL
******************:*** : :: :** . : . : ::*.:: *:
SPP00000034_1.0 NWGYRVALREKKVVYENAYGQFIGPHRIKATNNKG-KEKIYSAERFLIATGERPRYL-GI
SPP00000034_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000034_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000035_1.0 NWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGG-KEILLSADHIIIATGGRPRYPTHI
SPP00000035_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000035_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000036_1.0 NWGYRLSLREKAVAYVNSYGEFVEHHKIKATNKKG-QETYYTAAQFVIATGERPRYL-GI
SPP00000036_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000036_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000079_1.0 NWGYRVALREKKVVYENAYGRFIGPHRIVATNNKG-KEKIYSAERFLIATGERPRYL-GI
SPP00000079_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000079_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000080_1.0 NWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGG-KATLLSAEHIVIATGGRPRYPTQV
SPP00000080_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000080_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000081_1.0 NWGYRVTLREKGVTYVNSFGEFVDLHKIKATNKKG-QETFYTASKFVIATGERPRYL-GI
SPP00000081_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000081_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000090_1.0 NWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSG-ERT-ITAQTFVIAVGGRPRYP-DI
SPP00000090_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KK-TLTAEKIVIATGGRPKYPTHI
SPP00000090_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000091_1.0 NWVTRVDLRDKKVEYVNSMATFRDSHTIEYVAMPGAEHRQVTSEYVVVAVGGRPRYP-DI
SPP00000091_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000091_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000063_1.0 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKKK-KVEKLTADRFLISTGLRPKYP-EI
SPP00000063_1.0.17.exonerate NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
SPP00000063_1.0.17.genewise NWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGG-KKTTLTAEKIVIATGGRPKYPTHI
** *: *::: * * * . * . : : :: .:::.* **:* :
SPP00000034_1.0 PGDKEYCISSDDLFSLPYCPGKTLVV-GASYVALECAGFLAGIGLDVTVMVRSILLRGFD
SPP00000034_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000034_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000035_1.0 EGALEYGITSDDIFWLKESPGKTLVV-GASYVALECAGFLTGIGLDTTIMMRSIPLRGFD
SPP00000035_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000035_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000036_1.0 QGDKEYCITSDDLFSLPYCPGKTLVV-GASYVALECAGFLAGFGLDVTVMVRSILLRGFD
SPP00000036_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000036_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000079_1.0 PGDKEYCISSDDLFSLPYCPGKTLVV-GASYVALECAGFLAGIGLDVTVMVRSILLRGFD
SPP00000079_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000079_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000080_1.0 KGALEYGITSDDIFWLKESPGKTSVP-AAEDVALECAGFLTGIGLDTTVMMRSIPLRGFD
SPP00000080_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTSIM-GAKDVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000080_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTTACPAAGNVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000081_1.0 QGDKEYCITSDDLFSLPYCPGCTLVV-GASYVGLECAGFLAGLGLDVTVMVRSVLLRGFD
SPP00000081_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000081_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000090_1.0 PGAVEYGITSDDLFSLDREPGKTLVV-GAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFD
SPP00000090_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000090_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000091_1.0 PGAVELGITSDDIFSYEREPGRTLVV-GAGYVGLECACFLKGLGYEPTVMVRSIVLRGFD
SPP00000091_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000091_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000063_1.0 PGVKEYTITSDDLFQLPYSPGKTLCV-GASYVSLECAGFLHGFGFDVTVMVRSILLRGFD
SPP00000063_1.0.17.exonerate TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
SPP00000063_1.0.17.genewise TGALEYGITSDDLFWLKDSPGKTLVV-GASYVSLECAGFLTGVGLDTAVMMRSIPLRGFD
* * *:***:* ** * .* :.**** ** *.* : ::*:**: *****
SPP00000034_1.0 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAG---TPGRLRVVAQSTNSEE----IIEG
SPP00000034_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000034_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000035_1.0 QQMSSMVIEHMASHGTRFLRGCAPSRVRRLPD------GQLQVTWEDSTTGKED----TG
SPP00000035_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000035_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000036_1.0 QEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKG---SPGKLKVLAKSTEGTE----TIEG
SPP00000036_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000036_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000079_1.0 QDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAG---TPGRLRVTAQSTNSEE----TIEG
SPP00000079_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000079_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000080_1.0 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT------NQLQVTWEDHASGKED----TG
SPP00000080_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000080_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000081_1.0 QEMAEKVGSYLEQQGVKFQRKFTPILVQQLEKG---LPGKLKVVAKSTEGPE----TVEG
SPP00000081_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000081_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000090_1.0 QQMAELVAASMEERGIPFLRKTVPLSVEKQDD------GKLLVKYKNVETGEEA----ED
SPP00000090_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000090_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000091_1.0 RQMSELLAAMMTERGIPFLGTTIPKAVERQAD------GRLLVRYRNTTTQMDG----SD
SPP00000091_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000091_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000063_1.0 QDMAERIRKHMIAYGMKFE-AGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSE
SPP00000063_1.0.17.exonerate QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
SPP00000063_1.0.17.genewise QQMASLVTEHMESYGTKFLKKCVPMKVEKLES------GRLQVTWKNTDLGTEE----MD
::*:. : : * * * :.: .: * .
SPP00000034_1.0 EYNTVMLAI----------GRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAI
SPP00000034_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000034_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000035_1.0 TFDTVLWAI----------GRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAI
SPP00000035_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000035_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000036_1.0 VYNTVLLAI----------GRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAV
SPP00000036_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000036_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000079_1.0 EFNTVLLAV----------GRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAI
SPP00000079_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000079_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000080_1.0 TFDTVLWAI----------GRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAI
SPP00000080_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000080_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000081_1.0 IYNTVLLAI----------GRDSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAI
SPP00000081_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000081_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000090_1.0 VYDTVLWAI----------GRKGLVDDLNLPNAGVTVQK--DKIPVDSQEATNVANIYAV
SPP00000090_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000090_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000091_1.0 VFDTVLWAI----------GRKGLIEDLNLDAAGVKTHD--DKIVVDAAEATSVPHIFAV
SPP00000091_1.0.17.exonerate SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000091_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000063_1.0 EYNTILMAI----------GREAVTDDVGLTTIGVER-AKSKKVLGRREQSTTIPWVYAI
SPP00000063_1.0.17.exonerate SFDTVMWAVEKYNDLFFSLGRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
SPP00000063_1.0.17.genewise SFDTVMWAV----------GRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAI
::*:: *: ** :.* *: *: : *.:. ::*:
SPP00000034_1.0 GDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVE
SPP00000034_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000034_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000035_1.0 GDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVA
SPP00000035_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000035_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000036_1.0 GDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINVPTTVFTPLEYGCCGLSEEKAIE
SPP00000036_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000036_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000079_1.0 GDILEGKLELTPVAIQAGRLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVE
SPP00000079_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000079_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000080_1.0 GDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN-----------------------
SPP00000080_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDN-----------------------
SPP00000080_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDN-----------------------
SPP00000081_1.0 GDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIE
SPP00000081_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000081_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000090_1.0 GDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVK
SPP00000090_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000090_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000091_1.0 GDIIYGRPELTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLEYSCVGMSEETAIE
SPP00000091_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000091_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000063_1.0 GDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEEDAMM
SPP00000063_1.0.17.exonerate GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
SPP00000063_1.0.17.genewise GDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQ
**: . **** *: :*::* :*:: : :* :
SPP00000034_1.0 KFGEENIEVYHSYFWPLEWTIPSR-DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQG
SPP00000034_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000034_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000035_1.0 RHGQEHVEVYHAHYKPLEFTVAGR-DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQG
SPP00000035_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000035_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000036_1.0 VYKKENLEIYHTLFWPLEWTVAGR-ENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQG
SPP00000036_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000036_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000079_1.0 KFGEENIEVYHSFFWPLEWTVPSR-DNNKCYAKIICNLKDDERVVGFHVLGPNAGEVTQG
SPP00000079_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000079_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000080_1.0 --------VYHAYYKPLEFTVADR-DASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQG
SPP00000080_1.0.17.exonerate --------VFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000080_1.0.17.genewise --------VFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000081_1.0 MYKKENLEVYHTLFWPLEWTVAGR-DNNTCYAKIICNKFDNERVVGFHLLGPNAGEITQG
SPP00000081_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000081_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000090_1.0 QFGADEIEVFHGYYKPTEFFIPQK-SVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQG
SPP00000090_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000090_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000091_1.0 LRGADNIEVFHGYYKPTEFFIPQK-SVRHCYLKAVAEVSGDQKILGLHYIGPVAGEVIQG
SPP00000091_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000091_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000063_1.0 KYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGEVTQG
SPP00000063_1.0.17.exonerate CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
SPP00000063_1.0.17.genewise CYGSDNVEVFHAYYKPLEFTVAER-DAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQG
::* : * *: :. : . ** * :. : : *:* : * ***: **
SPP00000034_1.0 FAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASI-LQAGCUG
SPP00000034_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000034_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000035_1.0 FALGIKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDP-TVTGCUG
SPP00000035_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000035_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000036_1.0 FAAAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDI-TQKGCUG
SPP00000036_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000036_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000079_1.0 FAAALKCGLTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDI-LQSGCUG
SPP00000079_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000079_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000080_1.0 FALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEP-TVTGCUG
SPP00000080_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000080_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000081_1.0 FAAAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDI-TQKGCUG
SPP00000081_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTGCUG
SPP00000081_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000090_1.0 FAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLDP-TPASCCS
SPP00000090_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000090_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000091_1.0 FAAALKTGLTVKTLLNTVGIHPTTAEEFTRLSITKRSGRDP-TPASCCS
SPP00000091_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG-UC
SPP00000091_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDA-TVTG--C
SPP00000063_1.0 FGIALKLAAKKADFDRLIGIHPTVAENFTTLTLEKKEGDEELQASGCUG
SPP00000063_1.0.17.exonerate FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRS----------UG
SPP00000063_1.0.17.genewise FALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRS-----------G
*. .:* . . . :****. .* .. * : * .
......................................................................................................................................................................................................................................................
BEST PAIRWISE ALIGNMENT
CLUSTAL FORMAT for T-COFFEE Version_7.54, SCORE=100, Nseq=2, Len=524
SPP00000035_1.0 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ
SPP00000035_1.0.17.exonerate -----------------RTEALAAALVGSSQGRWVGRKEYDLLVIGGGSGGLACAKEAAQ
**:*:*..: *:::* .*:::*****:***************
SPP00000035_1.0 LGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP
SPP00000035_1.0.17.exonerate FGKKVAVLDYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMAHP
:*:****:*******:**:************************** ::** :***.:*:*
SPP00000035_1.0 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS
SPP00000035_1.0.17.exonerate VHHSWSVMAQAVQNYVKSLNWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGGKKTTLT
* *.* **:****:**************:******:*.**:*.*****:*****: *:
SPP00000035_1.0 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI
SPP00000035_1.0.17.exonerate AEKIVIATGGRPKYPTHITGALEYGITSDDLFWLKDSPGKTLVVGASYVSLECAGFLTGV
*::*:*******:***** ***********:****:*************:*********:
SPP00000035_1.0 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST
SPP00000035_1.0.17.exonerate GLDTAVMMRSIPLRGFDQQMASLVTEHMESYGTKFLKKCVPMKVEKLESGRLQVTWKNTD
****::**************:*:* *** *:**:**: *.* :*.:* .*:*****:::
SPP00000035_1.0 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV
SPP00000035_1.0.17.exonerate LGTEEMDSFDTVMWAVGRVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAIGDI
*.*: .:****:**:***** .:**** .**.*..:* **:**: *************:
SPP00000035_1.0 VEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG
SPP00000035_1.0.17.exonerate TEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQCYG
.******** ** **:**.:**** **:*************************:** :*
SPP00000035_1.0 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG
SPP00000035_1.0.17.exonerate SDNVEVFHAYYKPLEFTVAERDAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQGFALG
.::***:**:********* ***:***:******* * :*****:******* ******
SPP00000035_1.0 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCUG
SPP00000035_1.0.17.exonerate IKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDATVTGCUG
*****:*.*:*:*:******:**:.**:*:******.*****
......................................................................................................................................................................................................................................................
RESULTADOS DEL Selenoprofiles
Output_id: TR.26.selenocysteine
---------- --------------------
-Species Meleagris gallopavo -Taxid 9103
-Target /homes/users/U63748/gallopavo.fa
-Chromosome (-) 17
-Program exonerate
-Query name gi|170015974|ref|NP_001116163.1| thioredoxin reductase 2 [Gallus gallus]
-Query range 24-518 length:518 coverage: 0.96
-Profile range 767-1345 length:1345 coverage: 0.43 sec_position: [1344]
-Average sequence identity with profile: 0.5194 (ignoring gaps: 0.5626)
-State kept
------- alignment -------
Query LSGKKEYDLLVIGGGSGGLACAKEA <---Intron---> AQFGKNVAVLDYVEPSPRG <---Intron---> TKWGLGGTCVNVGCIPKKLMHQAA
| ||||||||||||||||||||| < 1484bp > ||||| ||||||||||||| < 238bp > ||||||||||||||||||||||||
Target FSTGKEYDLLVIGGGSGGLACAKEA AQFGKKVAVLDYVEPSPRG TKWGLGGTCVNVGCIPKKLMHQAA
ttagagtgccgagggtggcgtgagg gctgaagggtgtggctccg aatgcggatgaggtacaacaccgg
tccgaaaattttgggcggtcgcaa ccatgaatcttaatacccg gcaggtggcgtatggtcaattaacc
ccaaggttggctttatactttaaa ttgtggagttgtccattaa acagattattattccttagtgcgat
Query LLGGALKDAQHYGWSVAHPVHHNW <---Intron---> SVMAQAVQNYVKSLNWGHRVQLQDK <---Intron---> KVKYFNMKGSFSDSHTVCG
|||||||||||||||/||||||/| < 308bp > ||||||||||||||||||||||||| < 806bp > ||||||||||| |||||||
Target LLGGALKDAQHYGWSMAHPVHHSW SVMAQAVQNYVKSLNWGHRVQLQDK KVKYFNMKGSFLDSHTVCG
ctgggcaggcctgtaagccgccat tgagcggcatgattatgcagcccga agattaaagattgtcagtg
ttggctaacaaagggtcactaagg cttcactaaatactaggagtataaa ataatataggttacactgg
tagattatcgctcgtgccattcc gtggtattgttgacgcgacaggaac gggatccgaattgtctactt
Query IAKGGKE <---Intron---> TTLTAEKIVIATGGRPKYPTH <---Intron---> ITGALEYGITSDDLFWLKDSPGKT <---Intron--->
/|||||/ < 687bp > ||||||||||||||||||||| < 481bp > |||||||||||||||||||||||| < 3971bp >
Target LAKGGKK TTLTAEKIVIATGGRPKYPTH ITGALEYGITSDDLFWLKDSPGKT
tgaggaa aacaggaagagaggacatcac aaggcgtgaaaggctttagtcgaa
tcaggaa cctccaatttccgggcaacca tcgctaagtcgaattgtaaccgac
aaaagag tttttaatctttaaaaatcat tgcaggtacatttgcgaacttaa t
Query LVVGASYVSLECAGFLTGIGLDTTVIMRIIMRSIPLRGFDQ <---Intron---> QMASLVTEHMESYGTKFLKKCVPAKVEKLESSRLQVTWKNTEL
|/ / |||||||||||/|||| | /||||||||||| < 2146bp > ||||||||||||||||||||||| ||||||| |||||||||/|
Target LIDTSPDVSLECAGFLTGVGLDTAV----MMRSIPLRGFDQ QMASLVTEHMESYGTKFLKKCVPMKVEKLESGRLQVTWKNTDL
tagatcggtcgtggtcagggtgagg----aaaaacccgtgc cagttgagcagttgaattaatgcaaggatgagatcgataaagt
ttacccatctagcgttcgtgtacct----ttggtctggtaa atccttcaatacagcattaagtctataatagggtatcgaacat
atttaattgtattttatttagctac----ggatcattattg agataaggcgattcaatagatcagataagaccgaaccgattcg
Query GTEETDSFDTVMWAVG <---Intron---> RVPDIKTLNLDSVGVKTNSETGKIIVDASEATSVPHIYAIGDITE <---Intron---> GRPELTP
|||| ||||||||||| < 8911bp > |||||/||||/ ||||||||||||||||||||||||||||||||| < 4758bp > |||||||
Target GTEEMDSFDTVMWAVG RVPDIETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAIGDITE GRPELTP
gaggagttgagatggg cgcgagacatgagggaaatgagaaagggaggatgccatgaggaag gccgcac
gcaatactacttgct ggtcatactatattgtacacacgatttacgaccctcatactgatca ggcatcc
caaagtctcagggaa cgctctatctggtaagatttatagctttctatttttcttacacaag cttggac
Query TAIAAGKLLARRLFGHSSELMDYDN <---Intron---> VPTTVFTPLEYGCVGLSEEKAVQCYGSDNVE <---Intron---> VFHAYYKPLEFT
||||||||||||||||||||||||| < 214bp > ||||||||||||||||||||||||||||||| < 1276bp > ||||||||||||
Target TAIAAGKLLARRLFGHSSELMDYDN VPTTVFTPLEYGCVGLSEEKAVQCYGSDNVE VFHAYYKPLEFT
agagggaccgccctgcttgcagtga gcaagtactgtgtggctggaggcttgtgagg gtcgttaccgta
cctccgattcggttgaccattaaaa tcccttcctaaggtgtcaaactagagcaata ttacaaactatc
aaatagaggtgtttcctaaggctct attatctcgattttaggaagtggttaatttg gcttttatagca
Query VAERDAAQCYIK <---Intron---> MVCLREREQRILGLHFIGPNAGEVIQGFALGIK <---Intron---> CGATYPQLMKTIGIHPTCAEEIT
||||||||||/| < 1079bp > ||||||||||||||||||||||||||||||||| < 2190bp > |||||||||||||||||||||||
Target VAERDAAQCYMK MVCLREREQRILGLHFIGPNAGEVIQGFALGIK CGATYPQLMKTIGIHPTCAEEIT
gggagggcttaa agttcgagccacgcctagcaggggacgtgcgaa tggatcccaaaagaccatgggaa
tcagaccagata ttgtgagaagttgtattgcacgattagtctgta ggccacattactgtaccgcaatc
gtaatatgtcga ggcaagaggacccttctaattgattaatttac atttgctgaggatctctcttgatc
Query KLHITKRSGLDATVTGCUG
|||||||||||||||||||
Target KLHITKRSGLDATVTGCUG
atcaaactgcggagagttg
atatcagcgtacctcgggg
ggttaatccgtaaaatcat
*
------- positions -------
Exon 1 1062876 1062948
Exon 2 1061335 1061391
Exon 3 1060952 1061096
Exon 4 1060569 1060643
Exon 5 1059684 1059762
Exon 6 1058934 1058996
Exon 7 1058382 1058452
Exon 8 1054299 1054410
Exon 9 1051978 1052152
Exon 10 1042930 1043066
Exon 11 1038076 1038171
Exon 12 1037769 1037861
Exon 13 1036421 1036492
Exon 14 1035244 1035341
Exon 15 1032927 1033053
--------- SECIS ---------
>TR.26.selenocysteine.esecis:str.1 chromosome:17 strand:- positions:1030548-1030641 species:"Meleagris gallopavo"
target:/homes/users/U63748/gallopavo.fa distance_from_sec_uga:2288 distance_from_cds:2285
UAGGGCGUUU UUUCAGGA UGCCAGCUG AUGAU GGCUUGUUUGUC AA ACCACACCGUGG CGCAGACAAGUC UGAG CCU UGCUGGG UCCCUCAUGU
.......... .....((( (.(((((.( .(((( (((((((((((. .. .((((...)))) .))))))))))) )))) .). .)))))) ))).......
--------- 3' seq --------
Total sequence length available downstream >= 3000
Sequence until first stop codon:
TAA
*
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