SELENOPROTEÍNAS DE Meleagris gallopavo
PROTEIN REPORT FOR SECIS binding protein 2 (SBP 2)
| DESCRIPCIÓN | Proteína maquinaria síntesis selenoproteínas. 12(-):10275751...10275548. |
| SECISearch | Sin resultados. |
| SELENOPROFILES | No encontrada. |
| COMENTARIOS | Elección: El alineamiento de las predicciones de Exonerate y Genewise obtuvieron el mismo score pero por defecto reportamos el alineamiento de Genewise. Se trata una proteína de la maquinaria de síntesis de selenoproteínas, respaldando la funcionalidad de estas en Meleagris gallopavo. |
1. ALINEAMIENTO MÚLTIPLE DE TODOS LOS HOMÓLOGOS DE SELENODB
2. BEST PAIRWISE ALIGNMENT
ALINEAMIENTO MÚLTIPLE DE TODOS LOS HOMÓLOGOS DE SELENODB
CLUSTAL FORMAT for T-COFFEE Version_7.54, SCORE=81, Nseq=9, Len=882
SPP00000037_1.0 MASEGPREPESE-GIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPV
SPP00000037_1.0.12.exonerate ------------------------------------------------------------
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 MASERPREPDGEDSIKLSADVKPFVPKFAGLNVAWSESSETRVFPGCAATYYPFVQEPPA
SPP00000106_1.0.12.exonerate S-----------------------------------------------------------
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 MTEK-IRRSRNQDVQDTAIKIT--------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 TEQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCY
SPP00000037_1.0.12.exonerate ------------------------------------------------------------
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 AEQKMYPEDMAFGAPTFPAQYVSSEIALHPFAYPTYTLESAQSVCSVPTLQYDYSQARCH
SPP00000106_1.0.12.exonerate ------------------------------------------------------------
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 RGFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSH
SPP00000037_1.0.12.exonerate ------------------------------------------------------------
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 PGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGSS
SPP00000106_1.0.12.exonerate ------------------------------------------------------------
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 HLSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAEN-NMSEIQK
SPP00000037_1.0.12.exonerate ------------------------------------------------------------
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 HLSSRTESSLKSDGYHKRPDRKSRILAKSASTSKPEFEFSRLDFPELQSPKNSNMPETQK
SPP00000106_1.0.12.exonerate ------------------------------------------------------------
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 QPKWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWT
SPP00000037_1.0.12.exonerate ------------------------------------------------------------
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 PPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWT
SPP00000106_1.0.12.exonerate -------------------------------------------------KINVTQAQRWA
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 PMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHII
SPP00000037_1.0.12.exonerate --------------SSGPENRSKIVLLVDASQQTDIANKSLSESASTMLWKSKGRRRRAS
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 PMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVT-SEALSSNPSYNREKR-V
SPP00000106_1.0.12.exonerate PSNFPVQSTINKINISCTENIQQQLQMHIKNKRPPVKNVAT-QKETSSSGP-ENRSKI-V
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 HPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASER
SPP00000037_1.0.12.exonerate HPAAESSSEQGAKLNSDSGNSKSSNIQQKISPKTPIPITTSVPKRAKSQKKKALAAALAT
SPP00000037_1.0.12.genewise ------------------------------------------------------------
SPP00000106_1.0 YPAPKAKASQGGELEQNESSKKNKKKKEKSKPSYEVLTVQEPPRIEDAEEFPNLSVASER
SPP00000106_1.0.12.exonerate LLVDASQQTGGRQAEQRNSSQKRHEKPLTTSQSSRAEQSPEPLYFEDEDEFPELNSDSGN
SPP00000106_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 ------------------------------------------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 RDRIETPKFQSKQQ--PQDNFKNNVKKSQLPVQLDLGGM-LTALEKKQHSQHAKQ---SS
SPP00000037_1.0.12.exonerate AQEYSEISMEQKKL--QEALSKAAGKKSKTPVQLDLGDM-LAALEKQQQAMKARQI-TNT
SPP00000037_1.0.12.genewise -------------------------KKSKTPVQLDLGDM-LAALEKQQQAMKARQI-TNT
SPP00000106_1.0 RHRGQSPKLHSKQQ--TQNEFKTSGKKSQVPVQLDLGGM-LAALEKQQQQQHASHAKPSS
SPP00000106_1.0.12.exonerate S---KSSNIQQKISPKVEALSKAAGKKSKTPVQLDLGDM-LAALEKQQQAMKARQI-TNT
SPP00000106_1.0.12.genewise ---------------------KAAGKKSKTPVQLDLGDM-LAALEKQQQAMKARQI-TNT
SPP00000087_1.0 --------------PRS---SKYKNQHRKREQQTSLLDFVIKPRPKTQRQTKAHKL-QKT
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 KPVVVSVGA-VPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTS
SPP00000037_1.0.12.exonerate RPLSYTVGSAAPFHTKESANRKSLTKGQPSMGCLNPLDSTAPKVKRGKEREISKLKRPTA
SPP00000037_1.0.12.genewise RPLSYTVGSAAPFHTKESANRKSLTKGQPSMGCLNPLDSTAPKVKRGKEREISKLKRPTA
SPP00000106_1.0 RPVVFSVGA-VPVLSKDASSSERGRRSSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTS
SPP00000106_1.0.12.exonerate RPLSYTVGSAAPFHTKESANRKSLTKGQPSMGCLNPLDSTAPKVKRGKEREISKLKRPTA
SPP00000106_1.0.12.genewise RPLSYTVGSAAPFHTKESANRKSLTKGQPSMGCLNPLDSTAPKVKRGKEREISKLKRPTA
SPP00000087_1.0 H-LAITRGSYIVYK------------------------------PKGKTRLDPK-KKITR
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 LKKIILKERQERKQ-RLQE----------------NAVSPAFTSDDTQDGESGGDD-QFP
SPP00000037_1.0.12.exonerate LKKIILKEREEKKG-RLSVDHS------ILGSDEQKEVHISLPTDQSQELASQEETGLSM
SPP00000037_1.0.12.genewise LKKIILKEREEKKG-RLSVDHS------ILGSDEQKEVHISLPTDQSQELASQEETGLSM
SPP00000106_1.0 LKKIILKERQERMQQRLQE----------------SAVSLTVASDDSQDVESGASN-QTP
SPP00000106_1.0.12.exonerate LKKIILKEREEKKG-RLSVDHS------ILGSDEQKEVHISLPTDQSQELASQEETGLSM
SPP00000106_1.0.12.genewise LKKIILKEREEKKG-RLSVDHS------ILGSDEQKEVHISLPTDQSQELASQEETGLSM
SPP00000087_1.0 LKKSVRVYRTSKKA-EREVAENDLEGVPVVGQDIN-------------------------
SPP00000087_1.0.12.exonerate ------------------------------------------------------------
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000037_1.0 EQAELSGPEGMDE-LISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDY
SPP00000037_1.0.12.exonerate PSDTSLSPASQNSPYCMTPVSQGSPAS-SG--------IGSP-MASSAITKIHSKRFREY
SPP00000037_1.0.12.genewise PSDTSLSPASQNSPYCMTPVSQGSPAS-SG--------IGSP-MASSAITKIHSKRFREY
SPP00000106_1.0 SQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQPAPDSATFPKIHSRRFRDY
SPP00000106_1.0.12.exonerate PSDTSLSPASQNSPYCMTPVSQGSPAS-SG--------IGSP-MASSAITKIHSKRFREY
SPP00000106_1.0.12.genewise PSDTSLSPASQNSPYCMTPVSQGSPAS-SG--------IGSP-MASSAITKIHSKRFREY
SPP00000087_1.0 PNAIPLEQQVQNLSLSKTPAP------------------NNP-SQAKTVHAIHSRRFRSY
SPP00000087_1.0.12.exonerate ---------------------------------------GSP-MASSAITKIHSKRFREY
SPP00000087_1.0.12.genewise ----------------------------------------SP-MASSAITKIHSKRFREY
:. ***:***.*
SPP00000037_1.0 CSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCV
SPP00000037_1.0.12.exonerate CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000037_1.0.12.genewise CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000106_1.0 CSQMLSKEVDACVTGLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCI
SPP00000106_1.0.12.exonerate CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000106_1.0.12.genewise CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000087_1.0 CDNCTRPRLKELSTQLLRDLDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLL
SPP00000087_1.0.12.exonerate CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000087_1.0.12.genewise CNQVLSKEIDECVTLLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCV
*.: .:. * **::* **.* : *: ::*::: ***:*:**. ::::.*:* :
SPP00000037_1.0 IISPNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSY
SPP00000037_1.0.12.exonerate IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
SPP00000037_1.0.12.genewise IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
SPP00000106_1.0 IISPNCEKTQSKGGLDDTLHTIIDCACEQNIPFVFALNRKALGRSLNKAVPVSIVGIFSY
SPP00000106_1.0.12.exonerate IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
SPP00000106_1.0.12.genewise IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
SPP00000087_1.0 FLATDCEICPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDF
SPP00000087_1.0.12.exonerate IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
SPP00000087_1.0.12.genewise IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNY
:::.:** .:.*** :: : . :*::*: *.* *: *. .::* . :. *.*:.:
SPP00000037_1.0 DGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQGPSCPAEDGPPAL
SPP00000037_1.0.12.exonerate SGAEDLFNKLVSLTEEARKAYRDMVAAMEQEQAGHPTTAAPALMPCRGDCCSVKQGMPAG
SPP00000037_1.0.12.genewise SGAEDLFNKLVSLTEEARKAYRDMVAAMEQ------------------------------
SPP00000106_1.0 DGAQDQFHKMVELTMAARQAYKTMLETMRQEQAGEPGPQSPPSPPMQDPIPSTEEGTLPS
SPP00000106_1.0.12.exonerate SGAEDLFNKLVSLTEEARKAYRDMVAAMEQEQAE--------------------------
SPP00000106_1.0.12.genewise SGAEDLFNKLVSLTEEARKAYRDMVAAMEQEQAE--------------------------
SPP00000087_1.0 DGANATYADLLNEIEDARAEYKRRTA----------------------------------
SPP00000087_1.0.12.exonerate SGAEDLFNKLVSLTEEARKAYRDMVA----------------------------------
SPP00000087_1.0.12.genewise SG----------------------------------------------------------
.*
SPP00000037_1.0 KEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQMMNLNL
SPP00000037_1.0.12.exonerate ---------------------------------------KHR
SPP00000037_1.0.12.genewise -----------------------------------------E
SPP00000106_1.0 -TGEEPHYIEIWKKHLEAYSQRALELEDSLEASTSQMMNLNL
SPP00000106_1.0.12.exonerate -----------------------------------------E
SPP00000106_1.0.12.genewise -----------------------------------------E
SPP00000087_1.0 -----------------------------------------S
SPP00000087_1.0.12.exonerate -----------------------------------------A
SPP00000087_1.0.12.genewise -----------------------------------------A
......................................................................................................................................................................................................................................................
BEST PAIRWISE ALIGNMENT
CLUSTAL FORMAT for T-COFFEE Version_7.54, SCORE=99, Nseq=2, Len=313
SPP00000087_1.0 MTEKIRRSRNQDVQDTAIKITPRSSKYKNQHRKREQQTSLLDFVIKPRPKTQRQTKAHKL
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 QKTHLAITRGSYIVYKPKGKTRLDPKKKITRLKKSVRVYRTSKKAEREVAENDLEGVPVV
SPP00000087_1.0.12.genewise ------------------------------------------------------------
SPP00000087_1.0 GQDINPNAIPLEQQVQNLSLSKTPAPNNPSQAKTVHAIHSRRFRSYCDNCTRPRLKELST
SPP00000087_1.0.12.genewise ---------------------------SPMASSAITKIHSKRFREYCNQVLSKEIDECVT
.* :.:: ***:***.**:: .:.* *
SPP00000087_1.0 QLLRDLDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDCEICPGESG
SPP00000087_1.0.12.genewise LLLQELVSFQERIYQKDPMRAKARRRLVMGLREVTKHMKLNKIKCVIISPNCEKIQSKGG
**::* **:* : *: ::*:*: ***:*:**. ::::**:* ::::.:** .:.*
SPP00000087_1.0 LDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDFDGANATYADLLNEI
SPP00000087_1.0.12.genewise LDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSG------------
** :: .: .::*::*: *.* *: *. .::* . :. *.*:::.*
SPP00000087_1.0 EDARAEYKRRTAS
SPP00000087_1.0.12.genewise ------------A
:
......................................................................................................................................................................................................................................................