SPPSelW2a_Danio	gi|371559204|gb|JH584629.1|	77.78	27	6	0	43	69	2936033	2936113	2e-05	50.1
SPPSelW2a_Danio	gi|371559005|gb|JH584828.1|	70.37	27	8	0	43	69	2032767	2032687	6e-05	48.5

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPSelW2a_Danio
         (95 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584629.1| Chrysemys picta bellii unplaced genomic scaffold ...    50   2e-05
gb|JH584828.1| Chrysemys picta bellii unplaced genomic scaffold ...    49   6e-05

>gb|JH584629.1| Chrysemys picta bellii unplaced genomic scaffold Group240, whole genome
               shotgun sequence
          Length = 3012880

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 43      GSFEIEINGQLIFSKLETSGFPYEDDI 69
               G+FEIEINGQL+FSKLE  GFPYE D+
Sbjct: 2936033 GTFEIEINGQLVFSKLENGGFPYEKDV 2936113


>gb|JH584828.1| Chrysemys picta bellii unplaced genomic scaffold Scfld274, whole genome
               shotgun sequence
          Length = 2670124

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 19/27 (70%), Positives = 26/27 (96%)
 Frame = -2

Query: 43      GSFEIEINGQLIFSKLETSGFPYEDDI 69
               GSFE++ING+LIFSK+ETSGFP+ +D+
Sbjct: 2032767 GSFEVKINGKLIFSKIETSGFPFSEDV 2032687


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.319    0.141    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 248,266,141
Number of Sequences: 80983
Number of extensions: 2149742
Number of successful extensions: 5446
Number of sequences better than 1.0e-03: 2
Number of HSP's better than  0.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 2600
Number of HSP's gapped (non-prelim): 3993
length of query: 95
length of database: 863,242,946
effective HSP length: 70
effective length of query: 25
effective length of database: 857,574,136
effective search space: 21439353400
effective search space used: 21439353400
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 104 (44.7 bits)