SPPSelPbprecursor_Danio	gi|371559093|gb|JH584740.1|	64.79	71	25	0	74	144	3869686	3869898	3e-20	 102
SPPSelPbprecursor_Danio	gi|371559093|gb|JH584740.1|	53.12	64	29	1	11	73	3869167	3869358	1e-08	63.9
SPPSelPbprecursor_Danio	gi|371559093|gb|JH584740.1|	56.86	51	21	1	144	193	3872515	3872667	1e-08	63.9
SPPSelPbprecursor_Danio	gi|371559093|gb|JH584740.1|	56.86	51	21	1	144	193	3874737	3874889	2e-08	63.2
SPPSelPbprecursor_Danio	gi|371559382|gb|JH584451.1|	51.22	82	40	0	66	147	8561207	8561452	1e-13	80.9
SPPSelPbprecursor_Danio	gi|371559382|gb|JH584451.1|	37.80	82	41	2	4	75	8555984	8556226	3e-04	49.3

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPSelPbprecursor_Danio
         (360 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584740.1| Chrysemys picta bellii unplaced genomic scaffold ...   102   3e-20
gb|JH584451.1| Chrysemys picta bellii unplaced genomic scaffold ...    81   1e-13

>gb|JH584740.1| Chrysemys picta bellii unplaced genomic scaffold Scfld100, whole genome
               shotgun sequence
          Length = 5547169

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = +1

Query: 74      LGDLRDKLANGGLTNISFMVVNEQDSQSRAMYWELKRRTAQDIPVYQQSPLQNDVWEILE 133
               LG LR+KLA  GL +IS+M+VNE+   SRAM+WELKRR  + +PVYQQ  L+ DVW+IL+
Sbjct: 3869686 LGGLREKLAQDGLADISYMIVNEKAPLSRAMFWELKRRAPEGVPVYQQEILEPDVWQILD 3869865

Query: 134     GDKDDFLVYDR 144
               GDKDDFL+YDR
Sbjct: 3869866 GDKDDFLIYDR 3869898



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +1

Query: 11      AFPALLG-ASSLFVEKESSGSRICKPAPQWEIDGKTPMKELLGNVVVVALLKASUHFCLT 69
               A   LLG  ++   E   + +R+C+PAPQWEI+G  PM   LG V VVALLKAS  FCL 
Sbjct: 3869167 AVATLLGLVAATLAEVAENRTRLCQPAPQWEINGTAPMTGALGRVTVVALLKAS*QFCLK 3869346

Query: 70      QAAR 73
               QA R
Sbjct: 3869347 QANR 3869358



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +1

Query: 144     RCGYLTFHIVLPFSFLHYPYIEAAIRATYHKNMC-NCSLNANFSISESSDS 193
               RCG L FHI LP+SFLH+ Y+E+A+R TY K++C NCSL +N S+   S S
Sbjct: 3872515 RCGRLAFHIPLPYSFLHFRYVESAVRVTYAKDVCGNCSLYSNSSLEVRSSS 3872667



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +3

Query: 144     RCGYLTFHIVLPFSFLHYPYIEAAIRATYHKNMC-NCSLNANFSISESSDS 193
               RCG L FHI LP+SFLH+ Y+E+A+R TY K++C NCSL +N S+   S S
Sbjct: 3874737 RCGRLAFHIPLPYSFLHFRYVESAMRVTYAKDVCGNCSLYSNSSLEVRSSS 3874889


>gb|JH584451.1| Chrysemys picta bellii unplaced genomic scaffold Group62, whole genome
               shotgun sequence
          Length = 9093893

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/82 (51%), Positives = 51/82 (62%)
 Frame = +2

Query: 66      FCLTQAARLGDLRDKLANGGLTNISFMVVNEQDSQSRAMYWELKRRTAQDIPVYQQSPLQ 125
               F    + RL DLR KL N GL NIS+MVVN Q   S+     LK + +++I VYQQ   Q
Sbjct: 8561207 FSFKISIRLEDLRVKLENEGLVNISYMVVNHQGIHSQLKIHTLKEKVSENIIVYQQDENQ 8561386

Query: 126     NDVWEILEGDKDDFLVYDRCGY 147
                DVW  L G+KDDFL+YDR  Y
Sbjct: 8561387 TDVWTTLNGNKDDFLIYDRSVY 8561452



 Score = 49.3 bits (116), Expect = 3e-04
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
 Frame = +2

Query: 4       LWPLLLSAFPALLGASSLFV----------EKESSGSRICKPAPQWEIDGKTPMKELLGN 53
               L+ L+ S  PA+ G   L +          E + S +R CK  P+W+I+  +PM+    +
Sbjct: 8555984 LFSLICS*SPAMWGGLGLALVLCLLPGGGTESQGSSAR-CKEPPEWQIEEISPMQNTRSS 8556160

Query: 54      VVVVALLKASUHFCLTQAARLG 75
               V VVALL+AS + CL QA+R G
Sbjct: 8556161 VTVVALLQAS*YLCLLQASR*G 8556226


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.320    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,176,014,692
Number of Sequences: 80983
Number of extensions: 19283112
Number of successful extensions: 84231
Number of sequences better than 1.0e-03: 2
Number of HSP's better than  0.0 without gapping: 2609
Number of HSP's successfully gapped in prelim test: 571
Number of HSP's that attempted gapping in prelim test: 21729
Number of HSP's gapped (non-prelim): 73294
length of query: 360
length of database: 863,242,946
effective HSP length: 132
effective length of query: 228
effective length of database: 852,553,190
effective search space: 194382127320
effective search space used: 194382127320
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)