SPPSelT_gallus	gi|371559318|gb|JH584515.1|	81.67	60	11	1	84	143	20607	20780	1e-19	99.0
SPPSelT_gallus	gi|371559318|gb|JH584515.1|	89.58	48	5	0	152	199	27348	27491	1e-16	89.0
SPPSelT_gallus	gi|371559318|gb|JH584515.1|	97.30	37	1	0	51	87	19284	19394	6e-13	76.6
SPPSelT_gallus	gi|371559318|gb|JH584515.1|	100.00	29	0	0	130	158	23432	23518	7e-09	63.2

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPSelT_gallus
         (199 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584515.1| Chrysemys picta bellii unplaced genomic scaffold ...    99   1e-19

>gb|JH584515.1| Chrysemys picta bellii unplaced genomic scaffold Group126, whole genome
             shotgun sequence
          Length = 6499924

 Score = 99.0 bits (245), Expect = 1e-19
 Identities = 49/60 (81%), Positives = 52/60 (86%)
 Frame = +3

Query: 84    PIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMI 143
             P  RHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKV+    +FF SN +
Sbjct: 20607 PFDRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVH--HFLFFKSNFL 20780



 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/48 (89%), Positives = 43/48 (89%)
 Frame = +3

Query: 152   AFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMESMPHHRS 199
             AF   L DVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMESM HHRS
Sbjct: 27348 AFSFFLLDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMESMHHHRS 27491



 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 51    VSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYR 87
             VS GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYR
Sbjct: 19284 VS*GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYR 19394



 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +2

Query: 130   VYACMMVFFLSNMIENQCMSTGAFEITLN 158
             VYACMMVFFLSNMIENQCMSTGAFEITLN
Sbjct: 23432 VYACMMVFFLSNMIENQCMSTGAFEITLN 23518


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.325    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 574,133,825
Number of Sequences: 80983
Number of extensions: 8125606
Number of successful extensions: 44040
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 395
Number of HSP's that attempted gapping in prelim test: 12547
Number of HSP's gapped (non-prelim): 38093
length of query: 199
length of database: 863,242,946
effective HSP length: 124
effective length of query: 75
effective length of database: 853,201,054
effective search space: 63990079050
effective search space used: 63990079050
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 125 (52.8 bits)