SPPSelS_gallus	gi|371559184|gb|JH584649.1|	46.43	84	8	1	120	166	638432	638683	4e-09	63.9

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPSelS_gallus
         (194 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584649.1| Chrysemys picta bellii unplaced genomic scaffold ...    64   4e-09

>gb|JH584649.1| Chrysemys picta bellii unplaced genomic scaffold Group260, whole genome
              shotgun sequence
          Length = 9859116

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 39/84 (46%), Positives = 41/84 (48%), Gaps = 37/84 (44%)
 Frame = +2

Query: 120    IEMWESMQEGKSYKGNLKLSQ-------------------------------------QE 142
              I +WESMQEGKSYKGNLKL+Q                                     QE
Sbjct: 638432 IAIWESMQEGKSYKGNLKLNQVTLLFLNITCCSKYL*LDN*LKTTS*QALNNFHLSEQQE 638611

Query: 143    AESGASTSSAVPKSKPNKKPLRGG 166
               ES AS SS VPK KPNKKPLRGG
Sbjct: 638612 IESAASASSTVPKPKPNKKPLRGG 638683


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.312    0.129    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,171,767
Number of Sequences: 80983
Number of extensions: 5229398
Number of successful extensions: 25316
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 2658
Number of HSP's successfully gapped in prelim test: 404
Number of HSP's that attempted gapping in prelim test: 7349
Number of HSP's gapped (non-prelim): 21768
length of query: 194
length of database: 863,242,946
effective HSP length: 123
effective length of query: 71
effective length of database: 853,282,037
effective search space: 60583024627
effective search space used: 60583024627
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 125 (52.8 bits)