SPPSelP_human	gi|371559382|gb|JH584451.1|	76.39	72	17	0	68	139	8561228	8561443	4e-23	 112
SPPSelP_human	gi|371559382|gb|JH584451.1|	85.71	42	6	0	139	180	8562680	8562805	3e-14	82.8
SPPSelP_human	gi|371559382|gb|JH584451.1|	67.65	68	22	0	1	68	8556017	8556220	2e-12	76.6
SPPSelP_human	gi|371559382|gb|JH584451.1|	52.54	59	28	0	293	351	8572816	8572992	4e-07	58.9
SPPSelP_human	gi|371559093|gb|JH584740.1|	50.70	71	35	0	69	139	3869686	3869898	3e-12	75.9
SPPSelP_human	gi|371559093|gb|JH584740.1|	58.97	39	16	0	139	177	3872515	3872631	4e-07	58.9
SPPSelP_human	gi|371559093|gb|JH584740.1|	58.97	39	16	0	139	177	3874737	3874853	7e-07	58.2

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPSelP_human
         (381 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584451.1| Chrysemys picta bellii unplaced genomic scaffold ...   112   4e-23
gb|JH584740.1| Chrysemys picta bellii unplaced genomic scaffold ...    76   3e-12

>gb|JH584451.1| Chrysemys picta bellii unplaced genomic scaffold Group62, whole genome
               shotgun sequence
          Length = 9093893

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +2

Query: 68      KLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLL 127
               +LEDLRVKL+ EG  NISY+VVNHQGI S+LK   LK KVSE+I VYQQ+ENQTDVWT L
Sbjct: 8561228 RLEDLRVKLENEGLVNISYMVVNHQGIHSQLKIHTLKEKVSENIIVYQQDENQTDVWTTL 8561407

Query: 128     NGSKDDFLIYDR 139
               NG+KDDFLIYDR
Sbjct: 8561408 NGNKDDFLIYDR 8561443



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +2

Query: 139     RCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
               RCGRLVYHLGLP+SFLTFPYVEE+IKIAYCE KCGNCS   L
Sbjct: 8562680 RCGRLVYHLGLPYSFLTFPYVEESIKIAYCEYKCGNCSYMVL 8562805



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/68 (54%), Positives = 43/68 (63%)
 Frame = +2

Query: 1       MWRSXXXXXXXXXXPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
               MW            P GGTESQ  S+ CK+PP W I +  PM N+  SVTVVALLQAS Y
Sbjct: 8556017 MWGGLGLALVLCLLPGGGTESQGSSARCKEPPEWQIEEISPMQNTRSSVTVVALLQAS*Y 8556196

Query: 61      LCILQASK 68
               LC+LQAS+
Sbjct: 8556197 LCLLQASR 8556220



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = +1

Query: 293     SELAPRSUCCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAA 351
               S+    S C HCRHL+FE++G+A T  C+  LPS C   G    ENITES Q RLP AA
Sbjct: 8572816 SQSTSSS*C*HCRHLLFEESGNAAT*HCQGELPSSCR*HGQLLAENITES*Q*RLPTAA 8572992


>gb|JH584740.1| Chrysemys picta bellii unplaced genomic scaffold Scfld100, whole genome
               shotgun sequence
          Length = 5547169

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +1

Query: 69      LEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLN 128
               L  LR KL ++G ++ISY++VN +   SR  +  LK +  E +PVYQQE  + DVW +L+
Sbjct: 3869686 LGGLREKLAQDGLADISYMIVNEKAPLSRAMFWELKRRAPEGVPVYQQEILEPDVWQILD 3869865

Query: 129     GSKDDFLIYDR 139
               G KDDFLIYDR
Sbjct: 3869866 GDKDDFLIYDR 3869898



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +1

Query: 139     RCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSL 177
               RCGRL +H+ LP+SFL F YVE A+++ Y +  CGNCSL
Sbjct: 3872515 RCGRLAFHIPLPYSFLHFRYVESAVRVTYAKDVCGNCSL 3872631



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +3

Query: 139     RCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSL 177
               RCGRL +H+ LP+SFL F YVE A+++ Y +  CGNCSL
Sbjct: 3874737 RCGRLAFHIPLPYSFLHFRYVESAMRVTYAKDVCGNCSL 3874853


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.315    0.130    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,172,672,165
Number of Sequences: 80983
Number of extensions: 17880948
Number of successful extensions: 76629
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 538
Number of HSP's that attempted gapping in prelim test: 19998
Number of HSP's gapped (non-prelim): 66529
length of query: 381
length of database: 863,242,946
effective HSP length: 132
effective length of query: 249
effective length of database: 852,553,190
effective search space: 212285744310
effective search space used: 212285744310
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 129 (54.3 bits)
