SPPGPx3_gallus	gi|371559395|gb|JH584438.1|	78.18	55	12	0	7	61	128981	128817	7e-17	88.2
SPPGPx3_gallus	gi|371559395|gb|JH584438.1|	70.83	48	14	0	52	99	128119	127976	6e-15	81.6
SPPGPx3_gallus	gi|371559346|gb|JH584487.1|	45.35	86	46	1	10	94	6097393	6097650	6e-13	75.1
SPPGPx3_gallus	gi|371559115|gb|JH584718.1|	41.67	84	48	1	12	94	653351	653100	4e-12	72.4
SPPGPx3_gallus	gi|371559183|gb|JH584650.1|	51.72	58	28	1	1	58	3166136	3166306	2e-06	53.5
SPPGPx3_gallus	gi|371559413|gb|JH584420.1|	49.12	57	29	1	1	57	867998	868165	2e-06	53.1

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPGPx3_gallus
         (101 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584438.1| Chrysemys picta bellii unplaced genomic scaffold ...    88   7e-17
gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold ...    75   6e-13
gb|JH584718.1| Chrysemys picta bellii unplaced genomic scaffold ...    72   4e-12
gb|JH584650.1| Chrysemys picta bellii unplaced genomic scaffold ...    54   2e-06
gb|JH584420.1| Chrysemys picta bellii unplaced genomic scaffold ...    53   2e-06

>gb|JH584438.1| Chrysemys picta bellii unplaced genomic scaffold Group49, whole genome
              shotgun sequence
          Length = 9859369

 Score = 88.2 bits (217), Expect = 7e-17
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = -3

Query: 7      RGFVCIITNVASKUGKTAVNYTQLVDLHARYAEKGLRILAFPCNQFGKQEPGDDA 61
              RG VCIITNVASK GKT VNYTQLVD++ARYAE+GLRIL FPCNQFG Q  G  A
Sbjct: 128981 RGNVCIITNVASK*GKTDVNYTQLVDMYARYAERGLRILGFPCNQFGNQVGGTSA 128817



 Score = 81.6 bits (200), Expect = 6e-15
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -1

Query: 52     FGKQEPGDDAQIKAFAEGYGVKFDMFSKIEVNGDGAHPLWKWLKEQPK 99
              F   EPGD++QIK F   YGVKFDM+SKIEVNG+ AHPLWKW+K+QPK
Sbjct: 128119 FAS*EPGDESQIKQFVASYGVKFDMYSKIEVNGNNAHPLWKWMKDQPK 127976


>gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold Group98, whole genome
               shotgun sequence
          Length = 15338546

 Score = 75.1 bits (183), Expect = 6e-13
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +1

Query: 10      VCIITNVASKUGKTAVNYTQLVDLHARYAEKGLRILAFPCNQFGKQEPGDDAQIKAFA-E 68
               V ++ NVAS+ G T  +Y  L  L          +LAFPCNQFG+QEP  + +I++FA +
Sbjct: 6097393 VSLVVNVASECGFTDSHYKALQQLQRDLGSHHFNVLAFPCNQFGQQEPDSNKEIESFARK 6097572

Query: 69      GYGVKFDMFSKIEVNGDGAHPLWKWL 94
                YG  F MFSKI V G GA+  +K+L
Sbjct: 6097573 TYGASFPMFSKIAVTGAGANAAFKYL 6097650


>gb|JH584718.1| Chrysemys picta bellii unplaced genomic scaffold Scfld59, whole genome
              shotgun sequence
          Length = 6178864

 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 12     IITNVASKUGKTAVNYTQLVDLHARYAEKGLRILAFPCNQFGKQEPGDDAQIKAFAEG-Y 70
              ++ NVAS    T  NY  L +LH  +      +LAFPCNQFG+ EP    +I++FA+G Y
Sbjct: 653351 LVVNVASYCQHTDKNYIALQELHREFGPSHFTVLAFPCNQFGELEPSSSQEIESFAKGNY 653172

Query: 71     GVKFDMFSKIEVNGDGAHPLWKWL 94
              G  F +F KI++ G    P +K+L
Sbjct: 653171 GATFPIFHKIKILGSETEPAFKFL 653100


>gb|JH584650.1| Chrysemys picta bellii unplaced genomic scaffold Group261, whole genome
               shotgun sequence
          Length = 5063696

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 35/58 (60%)
 Frame = +2

Query: 1       VSLEQYRGFVCIITNVASKUGKTAVNYTQLVDLHARYAEKGLRILAFPCNQFGKQEPG 58
               V    +RG V +I NVAS  G T  +YTQL  L ARY  + L +L FPCNQFG Q  G
Sbjct: 3166136 VDFNNFRGRVVLIENVASL*GTTVRDYTQLNQLQARYPRR-LVVLGFPCNQFGYQVCG 3166306


>gb|JH584420.1| Chrysemys picta bellii unplaced genomic scaffold Group31, whole genome
              shotgun sequence
          Length = 981918

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 28/57 (49%), Positives = 37/57 (64%)
 Frame = +2

Query: 1      VSLEQYRGFVCIITNVASKUGKTAVNYTQLVDLHARYAEKGLRILAFPCNQFGKQEP 57
              ++L    G V +++NVAS  G TA ++ QL +L  RY   GL +LAFPCNQFG Q P
Sbjct: 867998 LALGSLLGRVLLVSNVASL*GTTARDFAQLSELQRRYGS-GLAVLAFPCNQFGHQVP 868165


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.320    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,389,030
Number of Sequences: 80983
Number of extensions: 3226605
Number of successful extensions: 17019
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 5832
Number of HSP's gapped (non-prelim): 13917
length of query: 101
length of database: 863,242,946
effective HSP length: 76
effective length of query: 25
effective length of database: 857,088,238
effective search space: 21427205950
effective search space used: 21427205950
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 121 (51.2 bits)