SPPGPx1_human gi|371559413|gb|JH584420.1| 69.83 116 35 0 85 200 870278 870625 9e-44 179 SPPGPx1_human gi|371559413|gb|JH584420.1| 68.75 64 20 1 21 84 867971 868159 1e-16 89.0 SPPGPx1_human gi|371559183|gb|JH584650.1| 66.10 59 20 0 138 196 3168940 3169116 7e-17 89.7 SPPGPx1_human gi|371559183|gb|JH584650.1| 71.70 53 15 0 84 136 3167778 3167936 5e-16 87.0 SPPGPx1_human gi|371559183|gb|JH584650.1| 64.79 71 25 2 14 84 3166091 3166297 2e-15 85.1 SPPGPx1_human gi|371559166|gb|JH584667.1| 46.81 47 25 0 146 192 1127758 1127618 2e-13 51.6 SPPGPx1_human gi|371559166|gb|JH584667.1| 48.89 45 18 1 97 136 1128009 1127875 2e-13 47.0 SPPGPx1_human gi|371559115|gb|JH584718.1| 37.50 96 60 1 34 129 653372 653100 2e-09 65.1 SPPGPx1_human gi|371559346|gb|JH584487.1| 41.76 91 53 1 39 129 6097393 6097650 3e-09 64.3 SPPGPx1_human gi|371559395|gb|JH584438.1| 55.10 49 22 0 36 84 128981 128835 1e-06 55.8 TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPPGPx1_human (203 letters) Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom e.fa 80,983 sequences; 2,589,728,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|JH584420.1| Chrysemys picta bellii unplaced genomic scaffold ... 179 9e-44 gb|JH584650.1| Chrysemys picta bellii unplaced genomic scaffold ... 90 7e-17 gb|JH584667.1| Chrysemys picta bellii unplaced genomic scaffold ... 52 2e-13 gb|JH584718.1| Chrysemys picta bellii unplaced genomic scaffold ... 65 2e-09 gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold ... 64 3e-09 gb|JH584438.1| Chrysemys picta bellii unplaced genomic scaffold ... 56 1e-06 >gb|JH584420.1| Chrysemys picta bellii unplaced genomic scaffold Group31, whole genome shotgun sequence Length = 981918 Score = 179 bits (453), Expect = 9e-44 Identities = 81/116 (69%), Positives = 95/116 (81%) Frame = +2 Query: 85 ENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALM 144 ENA NEEIL SLK+VRPG G+EPNF +FEKC+VNGA AHPLF FL+EALP P DD +LM Sbjct: 870278 ENATNEEILLSLKHVRPGNGYEPNFTMFEKCDVNGANAHPLFTFLKEALPFPHDDPMSLM 870457 Query: 145 TDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGP 200 T+P+ I WSPVCRND++WNFEKFL+G DGVP +RYSR F+TI I+ DIE LL P Sbjct: 870458 TNPQYIIWSPVCRNDISWNFEKFLIGRDGVPFKRYSRHFETIKIQDDIEKLLQHVP 870625 Score = 89.0 bits (219), Expect = 1e-16 Identities = 44/64 (68%), Positives = 51/64 (79%) Frame = +2 Query: 21 ARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 80 ARPL EP++LGSL G+VLL+ NVASL GTT RD+ Q++ELQRR G GL VL FPCNQ Sbjct: 867971 ARPLDAAEPLALGSLLGRVLLVSNVASL*GTTARDFAQLSELQRRYG-SGLAVLAFPCNQ 868147 Query: 81 FGHQ 84 FGHQ Sbjct: 868148 FGHQ 868159 >gb|JH584650.1| Chrysemys picta bellii unplaced genomic scaffold Group261, whole genome shotgun sequence Length = 5063696 Score = 89.7 bits (221), Expect = 7e-17 Identities = 39/59 (66%), Positives = 49/59 (83%) Frame = +1 Query: 138 DDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 196 D+ +ALM DPK + WSPV R+D++WNFEKFLVGP+G P +RYS +FQTI IEPDI+ LL Sbjct: 3168940 DEPSALMGDPKFVVWSPVRRDDLSWNFEKFLVGPEGEPFKRYSPKFQTIAIEPDIQRLL 3169116 Score = 87.0 bits (214), Expect = 5e-16 Identities = 38/53 (71%), Positives = 43/53 (81%) Frame = +3 Query: 84 QENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAP 136 QEN NEEILNSLKYVRPG GFEPNF LF+KC+VNG HP+FA+L+ LP P Sbjct: 3167778 QENCTNEEILNSLKYVRPGAGFEPNFTLFQKCQVNGPDVHPVFAYLKAHLPTP 3167936 Score = 85.1 bits (209), Expect = 2e-15 Identities = 46/71 (64%), Positives = 54/71 (76%) Frame = +2 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVV 73 +S Y SA + G E V + RG+V+LIENVASL GTTVRDYTQ+N+LQ R PR LVV Sbjct: 3166091 KSFYDLSATDIHG-EKVDFNNFRGRVVLIENVASL*GTTVRDYTQLNQLQARY-PRRLVV 3166264 Query: 74 LGFPCNQFGHQ 84 LGFPCNQFG+Q Sbjct: 3166265 LGFPCNQFGYQ 3166297 >gb|JH584667.1| Chrysemys picta bellii unplaced genomic scaffold Group278, whole genome shotgun sequence Length = 5394641 Score = 51.6 bits (122), Expect(2) = 2e-13 Identities = 22/47 (46%), Positives = 30/47 (63%) Frame = -2 Query: 146 DPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192 DPK + W P+ +D+ WNFEKFLVGP G P+ R+ R ++ DI Sbjct: 1127758 DPKRLFWEPLKIHDIKWNFEKFLVGPTGRPVMRWGPRTNLAVVKNDI 1127618 Score = 47.0 bits (110), Expect(2) = 2e-13 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%) Frame = -3 Query: 97 KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL-----REALPAP 136 +YVRPGGGF PNF LF+K +VNG + FL + +LP P Sbjct: 1128009 RYVRPGGGFVPNFQLFQKGDVNGEEEQKFYTFLKVRASKRSLPRP 1127875 >gb|JH584718.1| Chrysemys picta bellii unplaced genomic scaffold Scfld59, whole genome shotgun sequence Length = 6178864 Score = 65.1 bits (157), Expect = 2e-09 Identities = 36/96 (37%), Positives = 50/96 (52%) Frame = -3 Query: 34 SLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEIL 93 S+ K L+ NVAS T ++Y + EL R GP VL FPCNQFG E + ++EI Sbjct: 653372 SISLKASLVVNVASYCQHTDKNYIALQELHREFGPSHFTVLAFPCNQFGELEPSSSQEIE 653193 Query: 94 NSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL 129 + K G + F +F K ++ G+ P F FL Sbjct: 653192 SFAK-----GNYGATFPIFHKIKILGSETEPAFKFL 653100 >gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold Group98, whole genome shotgun sequence Length = 15338546 Score = 64.3 bits (155), Expect = 3e-09 Identities = 38/91 (41%), Positives = 49/91 (53%) Frame = +1 Query: 39 VLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKY 98 V L+ NVAS G T Y + +LQR LG VL FPCNQFG QE N+EI + + Sbjct: 6097393 VSLVVNVASECGFTDSHYKALQQLQRDLGSHHFNVLAFPCNQFGQQEPDSNKEIESFARK 6097572 Query: 99 VRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL 129 + +F +F K V GAGA+ F +L Sbjct: 6097573 T-----YGASFPMFSKIAVTGAGANAAFKYL 6097650 >gb|JH584438.1| Chrysemys picta bellii unplaced genomic scaffold Group49, whole genome shotgun sequence Length = 9859369 Score = 55.8 bits (133), Expect = 1e-06 Identities = 27/49 (55%), Positives = 34/49 (69%) Frame = -3 Query: 36 RGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ 84 RG V +I NVAS G T +YTQ+ ++ R RGL +LGFPCNQFG+Q Sbjct: 128981 RGNVCIITNVASK*GKTDVNYTQLVDMYARYAERGLRILGFPCNQFGNQ 128835 Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen ome.fa Posted date: Oct 24, 2012 8:30 PM Number of letters in database: 2,589,728,838 Number of sequences in database: 80,983 Lambda K H 0.321 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 624,677,170 Number of Sequences: 80983 Number of extensions: 10257861 Number of successful extensions: 34941 Number of sequences better than 1.0e-05: 6 Number of HSP's better than 0.0 without gapping: 2372 Number of HSP's successfully gapped in prelim test: 447 Number of HSP's that attempted gapping in prelim test: 11184 Number of HSP's gapped (non-prelim): 29579 length of query: 203 length of database: 863,242,946 effective HSP length: 124 effective length of query: 79 effective length of database: 853,201,054 effective search space: 67402883266 effective search space used: 67402883266 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)