SPPDI3_gallus	gi|371559332|gb|JH584501.1|	86.55	275	36	1	1	274	1688475	1687651	2e-118	 427
SPPDI3_gallus	gi|371559103|gb|JH584730.1|	40.44	183	87	3	99	259	5138261	5137713	3e-33	 144
SPPDI3_gallus	gi|371559346|gb|JH584487.1|	45.59	68	37	1	173	240	7820845	7821045	7e-08	60.8
SPPDI3_gallus	gi|371559346|gb|JH584487.1|	59.09	44	18	0	127	170	7815281	7815412	1e-07	59.7

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPDI3_gallus
         (274 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584501.1| Chrysemys picta bellii unplaced genomic scaffold ...   427   e-118
gb|JH584730.1| Chrysemys picta bellii unplaced genomic scaffold ...   144   3e-33
gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold ...    61   7e-08

>gb|JH584501.1| Chrysemys picta bellii unplaced genomic scaffold Group112, whole genome
               shotgun sequence
          Length = 13335695

 Score =  427 bits (1099), Expect = e-118
 Identities = 217/275 (78%), Positives = 228/275 (82%), Gaps = 1/275 (0%)
 Frame = -3

Query: 1       MLHSXXXXXXXXXXXXXXXXXXFPRFLLTAVMLWLLDFLCIRKKMLTMPTXXXXXXXXXX 60
               MLHS                  FPRFLLTA+MLWLLDFLCIRKK+L + +          
Sbjct: 1688475 MLHSLGVHTLQLLTQVAACILLFPRFLLTALMLWLLDFLCIRKKVLLVGSRAEEEACPGQ 1688296

Query: 61      XXXXXXX-VCVSDSNRMFTLESLKAVWHGQKLDFFKSAHVGSPAPNPEVIQLDGQKRLRI 119
                       VCVSDSNRMFTLESLKAVWHGQKLDFFKSAHVGS APNPEVIQLDGQKRLR+
Sbjct: 1688295 EPPPDDPPVCVSDSNRMFTLESLKAVWHGQKLDFFKSAHVGSSAPNPEVIQLDGQKRLRL 1688116

Query: 120     LDFARGKRPLILNFGSCTUPPFMARLRSFRRLAAHFVDIADFLLVYIEEAHPSDGWVSSD 179
               LD+ARGKRPLILNFGSCT PPFMARLRSF+RLAAHFVDIADFLLVYIEEAHPSDGWVSSD
Sbjct: 1688115 LDYARGKRPLILNFGSCT*PPFMARLRSFQRLAAHFVDIADFLLVYIEEAHPSDGWVSSD 1687936

Query: 180     AAYSIPKHQCLQDRLRAAQLMREGAPDCPLAVDTMDNASSAAYGAYFERLYVIQEEKVMY 239
               AAY IPKHQCLQDRLRAAQLM+EGAP CPLAVDTMDNASSAAYGA+FERLY+IQEE VMY
Sbjct: 1687935 AAYQIPKHQCLQDRLRAAQLMQEGAPGCPLAVDTMDNASSAAYGAFFERLYIIQEEVVMY 1687756

Query: 240     QGGRGPEGYKISELRSWLDQYKTRLQSPGAVVIQV 274
               QGGRGPEGYKISELRSWL+QYK RLQSP  VVI V
Sbjct: 1687755 QGGRGPEGYKISELRSWLNQYKNRLQSPSTVVIHV 1687651


>gb|JH584730.1| Chrysemys picta bellii unplaced genomic scaffold Scfld77, whole genome
               shotgun sequence
          Length = 5451746

 Score =  144 bits (364), Expect = 3e-33
 Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 22/183 (12%)
 Frame = -1

Query: 99      VGSPAPNPEVIQLDGQK----------------RLRILDFARGKRPLILNFGSCTUPPFM 142
               +G  APN  VI +                    +  +LDFA  +RPL++NFGS T PPF 
Sbjct: 5138261 LGGEAPNSNVIHIANGSSSSSSRRKSVGGKYGTKCHLLDFANSERPLVVNFGSAT*PPFT 5138082

Query: 143     ARLRSFRRLAAHFVDIADFLLVYIEEAHPSDGWVS---SDAAYSIPKHQCLQDRLRAAQL 199
               ++L +F +L   F  +ADFLLVYI+EAHPSDGW +   S +++ + KH+  +DR  AA  
Sbjct: 5138081 SQLSAFGKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVRKHRNQEDRCAAANQ 5137902

Query: 200     MREG---APDCPLAVDTMDNASSAAYGAYFERLYVIQEEKVMYQGGRGPEGYKISELRSW 256
               + E     P C +  D MDN ++ AYG  FER+ ++Q +K+ Y GG+GP  Y + E+R W
Sbjct: 5137901 LLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEVRLW 5137722

Query: 257     LDQ 259
               L+Q
Sbjct: 5137721 LEQ 5137713


>gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold Group98, whole genome
               shotgun sequence
          Length = 15338546

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = +1

Query: 173     DGWVSSDAAYSIPKHQCLQDRLRAAQLMREGAPDCPLAVDTMDNASSAAYGAYFERLYVI 232
               DGW   +    I  H+ LQDR +AAQ + +  P CP+ +DTM+N SS+ Y A  ERLY++
Sbjct: 7820845 DGWAFKNNIV-INNHRNLQDRKKAAQFLLKENPLCPVVLDTMENLSSSKYAALPERLYLV 7821021

Query: 233     QEEKVMYQ 240
               Q  KV+Y+
Sbjct: 7821022 QGGKVVYK 7821045



 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +2

Query: 127     RPLILNFGSCTUPPFMARLRSFRRLAAHFVDIADFLLVYIEEAH 170
               RPL+LNFGSCT P F+ +   F +L   F  IADFL++YIEEAH
Sbjct: 7815281 RPLVLNFGSCT*PSFLFKFSEFNKLVEDFNSIADFLIIYIEEAH 7815412


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.325    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 849,299,893
Number of Sequences: 80983
Number of extensions: 13074274
Number of successful extensions: 58281
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 394
Number of HSP's that attempted gapping in prelim test: 20916
Number of HSP's gapped (non-prelim): 48115
length of query: 274
length of database: 863,242,946
effective HSP length: 129
effective length of query: 145
effective length of database: 852,796,139
effective search space: 123655440155
effective search space used: 123655440155
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 127 (53.5 bits)