SPPDI2_gallus	gi|371559103|gb|JH584730.1|	91.41	198	17	0	74	271	5138270	5137677	3e-100	 367
SPPDI2_gallus	gi|371559103|gb|JH584730.1|	96.00	75	3	0	1	75	5148730	5148506	2e-33	 145
SPPDI2_gallus	gi|371559332|gb|JH584501.1|	36.06	269	157	5	14	267	1688412	1687672	2e-40	 168
SPPDI2_gallus	gi|371559346|gb|JH584487.1|	61.36	44	17	0	121	164	7815281	7815412	3e-08	62.0

TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPPDI2_gallus
         (279 letters)

Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genom
e.fa 
           80,983 sequences; 2,589,728,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH584730.1| Chrysemys picta bellii unplaced genomic scaffold ...   367   e-100
gb|JH584501.1| Chrysemys picta bellii unplaced genomic scaffold ...   168   2e-40
gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold ...    62   3e-08

>gb|JH584730.1| Chrysemys picta bellii unplaced genomic scaffold Scfld77, whole genome
               shotgun sequence
          Length = 5451746

 Score =  367 bits (942), Expect = e-100
 Identities = 181/198 (91%), Positives = 187/198 (94%)
 Frame = -1

Query: 74      QVKLGGEAPNSSVIHIAKGNDGSNSSWKSVGGKCGTKCHLLDFANSERPLVVNFGSATUP 133
               QVKLGGEAPNS+VIHIA G+  S+S  KSVGGK GTKCHLLDFANSERPLVVNFGSAT P
Sbjct: 5138270 QVKLGGEAPNSNVIHIANGSSSSSSRRKSVGGKYGTKCHLLDFANSERPLVVNFGSAT*P 5138091

Query: 134     PFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVKKHRNQEDRCAA 193
               PFTSQLSAF KLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEV+KHRNQEDRCAA
Sbjct: 5138090 PFTSQLSAFGKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVRKHRNQEDRCAA 5137911

Query: 194     AHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV 253
               A+QLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV
Sbjct: 5137910 ANQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV 5137731

Query: 254     RLWLEQNFSKRUNPLSTE 271
               RLWLEQNFSKR NP+  E
Sbjct: 5137730 RLWLEQNFSKR*NPV*VE 5137677



 Score =  145 bits (366), Expect = 2e-33
 Identities = 72/75 (96%), Positives = 73/75 (97%)
 Frame = -2

Query: 1       MGLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSKSARGEWRRMLTSEGL 60
               MGLLSVDLLI LQILPVFFSNCLFLALYDSVILLKHMVL LSRSK+ARGEWRRMLTSEGL
Sbjct: 5148730 MGLLSVDLLIALQILPVFFSNCLFLALYDSVILLKHMVLLLSRSKAARGEWRRMLTSEGL 5148551

Query: 61      RCVWNSFLLDAYKQV 75
               RCVWNSFLLDAYKQV
Sbjct: 5148550 RCVWNSFLLDAYKQV 5148506


>gb|JH584501.1| Chrysemys picta bellii unplaced genomic scaffold Group112, whole genome
               shotgun sequence
          Length = 13335695

 Score =  168 bits (426), Expect = 2e-40
 Identities = 97/269 (36%), Positives = 143/269 (53%), Gaps = 15/269 (5%)
 Frame = -3

Query: 14      ILPVFFSNCLFLALYDSVILLKHMVLFLSRSKSAR---------------GEWRRMLTSE 58
               + P F    L L L D + + K ++L  SR++                   +  RM T E
Sbjct: 1688412 LFPRFLLTALMLWLLDFLCIRKKVLLVGSRAEEEACPGQEPPPDDPPVCVSDSNRMFTLE 1688233

Query: 59      GLRCVWNSFLLDAYKQVKLGGEAPNSSVIHIAKGNDGSNSSWKSVGGKCGTKCHLLDFAN 118
                L+ VW+   LD +K   +G  APN  VI +    DG              +  LLD+A 
Sbjct: 1688232 SLKAVWHGQKLDFFKSAHVGSSAPNPEVIQL----DGQK------------RLRLLDYAR 1688101

Query: 119     SERPLVVNFGSATUPPFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSS 178
                +RPL++NFGS T PPF ++L +F +L   F  +ADFLLVYI+EAHPSDGW +   S ++
Sbjct: 1688100 GKRPLILNFGSCT*PPFMARLRSFQRLAAHFVDIADFLLVYIEEAHPSDGWVS---SDAA 1687930

Query: 179     FEVKKHRNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIA 238
               +++ KH+  +DR  AA  + E     P C +  D MDN ++ AYG  FER+ I+Q + + 
Sbjct: 1687929 YQIPKHQCLQDRLRAAQLMQEG---APGCPLAVDTMDNASSAAYGAFFERLYIIQEEVVM 1687759

Query: 239     YLGGKGPFFYNLQEVRLWLEQNFSKRUNP 267
               Y GG+GP  Y + E+R WL Q  ++  +P
Sbjct: 1687758 YQGGRGPEGYKISELRSWLNQYKNRLQSP 1687672


>gb|JH584487.1| Chrysemys picta bellii unplaced genomic scaffold Group98, whole genome
               shotgun sequence
          Length = 15338546

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = +2

Query: 121     RPLVVNFGSATUPPFTSQLSAFSKLVEEFSGVADFLLVYIDEAH 164
               RPLV+NFGS T P F  + S F+KLVE+F+ +ADFL++YI+EAH
Sbjct: 7815281 RPLVLNFGSCT*PSFLFKFSEFNKLVEDFNSIADFLIIYIEEAH 7815412


  Database: /cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/gen
  ome.fa
    Posted date:  Oct 24, 2012  8:30 PM
  Number of letters in database: 2,589,728,838
  Number of sequences in database:  80,983
  
Lambda     K      H
   0.321    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,007,323,439
Number of Sequences: 80983
Number of extensions: 16465143
Number of successful extensions: 71805
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 561
Number of HSP's that attempted gapping in prelim test: 16365
Number of HSP's gapped (non-prelim): 63417
length of query: 279
length of database: 863,242,946
effective HSP length: 129
effective length of query: 150
effective length of database: 852,796,139
effective search space: 127919420850
effective search space used: 127919420850
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)