
#####SECIS DE HUMAN#####

DI1_human
>gi|371559346|gb|JH584487.1|:subseq(7803113,27932):[20622,20712] [20622 - 20712] - Free Energy: -17.72 
CAUCAGCAUU GGUUCUA UUAAUAUUUGUUU AUGAC AGUCAUAGCAU AA AGCCCAGGC AGCUGUGACC UGAU UUG UGAAAAU AUUUAUAGAG

DI2_human
>gi|371559103|gb|JH584730.1|:subseq(5127698,31032):[5043,4945] [4945 - 5043] (SECIS on complementary strand) - Free Energy: -30.46 
UGAGGGCAAG GCAGGGG UGCUAGUGUGCUC AUGAA GACCGCUAACA AA AGAGUAACUAACUC CGUUGGCGUUC AGAU GCCAU CACACUG GCAUUUCUUU

GPx1_human
>gi|371559413|gb|JH584420.1|:subseq(857971,22654):[12809,12898] [12809 - 12898] - Free Energy: -19.88 
AAUGCCGUUG UCCAUGG AAAUUUUACUC AUGAA GGUGCUUCUUCC AA AUUCUUC AGGAGAAGCACU UGAU GUA UUCUGUA AAAGUUGCAU

GPx8_human
>gi|371559115|gb|JH584718.1|:subseq(638779,25436):[1829,1923] [1829 - 1923] - Free Energy: -19.57 
UUAACUGCCU UGCUGAA UCAGGGC AUGAG CUUUCCAGUUA AA UCCAGUAAAACUGGUG UGAAUGAAAAG CGAA UCUAG UCUAACA CUUUCUGAAA
#####SECIS TROBATS PEL PROGRAMA SELENOPROFILES#####

MsrA_human (?)
>gi|371559260|gb|JH584573.1|:subseq(1564714,231892):[211602,211505] [211505 - 211602] (SECIS on complementary strand) - Free Energy: -17.79 
AUGGUAUAAU GGGCUAU UGGAACUCCCUGU AUGAC UGUACUGCUCC AA CUUAAUUG GGAGCUGUGGG ACGAG CAAACAGGA AAGUAAC ACAAUAGAUC

SelM_human
>gi|371559437|gb|JH584396.1|:subseq(206656,20510):[10831,10928] [10831 - 10928] - Free Energy: -36.02 
GUGUCAGGGC CCCCUGC CUGCAGGGACAGA AUGAA GCCCUCAGCUG AA AGCUCUGG GUGCUGAGGGU GGAU GAGCUGAGUC CCAGAGG GCACAGGGUC

SelP_human
>gi|371559382|gb|JH584451.1|:subseq(8546017,36975):[28045,28134] [28045 - 28134] - Free Energy: -18.46 
UGAAUGCUUU GAAAGCA CAUGCCAUAGUUA AUGAU GGUUUAAUAGGG AA ACUGUC UCCUACAAAACC UGAA UCC UUUUAU GGUGAAUGCU

SelR1_human
>gi|371559291|gb|JH584542.1|:subseq(5316256,22061):[14818,14912] [14818 - 14912] - Free Energy: -26.30 
CCUGCUAUUU UCUGGUC UGGGAUCAUGGU AUGAA UUGCCCUAGGU AA ACCCUUCCAGGAU GGUUAGGGUAA GGAU GUUU GGAUGA UCCUACCAGA

SelT_human
>gi|371559318|gb|JH584515.1|:subseq(9284,28207):[23436,23531] [23436 - 23531] - Free Energy: -24.65 
ACUUUCCCAA AGGCAGC GUGACUGAAACCU AUGAA GGCCUGUACUG AA GACAGCAAGCUGU UAGUGCAGACU GGAU GCA CUCUUUU CAGUCAUGUU

SPS2_human (?)
>gi|371559405|gb|JH584428.1|:subseq(339766,26721):[9404,9302] [9302 - 9404] (SECIS on complementary strand) - Free Energy: -38.02
GUGGCUGGACAUGUGCCCUUCCUCUCUUUAAUGAAGCUCUUCCCCUUAAACCCACCCUGGGGCUAGGAGGAGUCGAGGACCCCCAGAGGGCAGGGCACCAGCU

TR2_human (?)
>gi|371559395|gb|JH584438.1|:subseq(4398048,66404):[6315,6220] [6220 - 6315] (SECIS on complementary strand) - Free Energy: -30.03 
GUCAGGCUGU CUUCUUG GGGUGCCAGCUA AUGAU GGCUUGUUUGUC AA ACCACACAGUGG AGUAGACAAGUC UGAG GAU UGCUGGA CCCCUAUUAA


#####SECIS DE GALLUS#####

DI1_gallus
>gi|371559346|gb|JH584487.1|:subseq(7803083,27962):[20652,20742] [20652 - 20742] - Free Energy: -17.72
CAUCAGCAUU GGUUCUA UUAAUAUUUGUUU AUGAC AGUCAUAGCAU AA AGCCCAGGC AGCUGUGACC UGAU UUG UGAAAAU AUUUAUAGAG

GPx1_gallus
>gi|371559413|gb|JH584420.1|:subseq(857974,22651):[12806,12895] [12806 - 12895] - Free Energy: -19.88 AAUGCCGUUGUCCAUGGAAAUUUUACUCAUGAAGGUGCUUCUUCCAAAUUCUUCAGGAGAAGCACUUGAUGUAUUCUGUAAAAGUUGCAU

SelM_gallus
>gi|371559437|gb|JH584396.1|:subseq(206656,20510):[10831,10928] [10831 - 10928] - Free Energy: -36.02
GUGUCAGGGC CCCCUGC CUGCAGGGACAGA AUGAA GCCCUCAGCUG AA AGCUCUGG GUGCUGAGGGU GGAU GAGCUGAGUC CCAGAGG GCACAGGGUC

SelPa_gallus
>gi|371559382|gb|JH584451.1|:subseq(8546017,37062):[28045,28134] [28045 - 28134] - Free Energy: -18.46 
UGAAUGCUUU GAAAGCA CAUGCCAUAGUUA AUGAU GGUUUAAUAGGG AA ACUGUC UCCUACAAAACC UGAA UCC UUUUAU GGUGAAUGCU

SelPb_gallus
>gi|371559093|gb|JH584740.1|:subseq(3859686,25164):[16819,16916] [16819 - 16916] - Free Energy: -38.16 
UCCUCCCCGG AUCCCGC CUGUCCGCGCUCA AUGAA GCCCGUGGCGC AA ACCGGGCUCUCCCGG UCACCACGGGC CGAC GCU GCGCAGA AAAGCGCGUC

SelR_gallus
>gi|371559291|gb|JH584542.1|:subseq(5316256,22061):[14818,14912] [14818 - 14912] - Free Energy: -26.30 
CCUGCUAUUU UCUGGUC UGGGAUCAUGGU AUGAA UUGCCCUAGGU AA ACCCUUCCAGGAU GGUUAGGGUAA GGAU GUUU GGAUGA UCCUACCAGA

SelT_gallus
>gi|371559318|gb|JH584515.1|:subseq(9284,28207):[23436,23531] [23436 - 23531] - Free Energy: -24.65 
ACUUUCCCAA AGGCAGC GUGACUGAAACCU AUGAA GGCCUGUACUG AA GACAGCAAGCUGU UAGUGCAGACU GGAU GCA CUCUUUU CAGUCAUGUU

SPS2_gallus (?)
>gi|371559395|gb|JH584438.1|:subseq(4398048,66404):[6315,6220] [6220 - 6315] (SECIS on complementary strand) - Free Energy: -30.03
GUCAGGCUGU CUUCUUG GGGUGCCAGCUA AUGAU GGCUUGUUUGUC AA ACCACACAGUGG AGUAGACAAGUC UGAG GAU UGCUGGA CCCCUAUUAA


#####SECIS DE SELENOPROFILES#####

DI3
--------- SECIS ---------
>DI.1.selenocysteine.esecis:def.1 chromosome:gi|371559332|gb|JH584501.1| strand:- positions:1687217-1687323 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:735 distance_from_cds:327
AAACACUAGU UGGCAUUU CUGGUAUCGCUUG GUGAC GACCGAUUUUGA AA UGGUUUUCAAAAUACC AGGGAAUCGAGUC CGAU GUUGUU AGAUACUA GAAGUGCCAC
.......... (((((((( ((((((((....( .(((( ((((((((((.. .. ((((.((...)).))) ).))))))).))) )))) .).... .))))))) ))))))))).

DI1
--------- SECIS ---------
>DI.6.selenocysteine.esecis:str.1 chromosome:gi|371559346|gb|JH584487.1| strand:+ positions:7823734-7823826 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:1477 distance_from_cds:1111
ACAUCAGCAU UGGUUCUA UUAAUAUUUGUUU AUGAC AGUCAUAGCAU AA AGCCCAGGC AGCUGUGACC UGAU UUG UGAAAAUA UUUAUAGAGG
.......... ...((((( (.(((((((..(. .(((( .((((((((.. .. ......... .)))))))). )))) ..) ...))))) )).)))))).

GPx1
--------- SECIS ---------
>GPx.2.selenocysteine.esecis:str.1 chromosome:gi|371559413|gb|JH584420.1| strand:+ positions:870780-870869 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:604 distance_from_cds:157
AAUGCCGUUG UCCAUGGA AAUUUUACUC AUGAA GGUGCUUCUUCC AA AUUCUUC AGGAGAAGCACU UGAU GUA UUCUGUA AAAGUUGCAU
(((.((((.. ...)))). .)))...... .(((( (((((((((((. .. ....... .))))))))))) )))) ((( ..((... ..)).)))..
>GPx.2.selenocysteine.esecis:str.2 chromosome:gi|371559413|gb|JH584420.1| strand:+ positions:870780-870869 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:604 distance_from_cds:157
AAUGCCGUUG UCCAUGGA AAUUUUACUC AUGAA GGUGCUUCUUCC AA AUUCUUC AGGAGAAGCACU UGAU GUA UUCUGUA AAAGUUGCAU
(((.((((.. ...)))). .)))...... .(((( (((((((((((. .. ....... .))))))))))) )))) ((( ..((... ..)).)))..

GPx2
--------- SECIS ---------
>GPx.7.selenocysteine.esecis:def.1 chromosome:gi|371559183|gb|JH584650.1| strand:+ positions:3169169-3169265 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:490 distance_from_cds:46
CUGGAGGGGC ACGGCGUC AGCGCUUUACCGG GUGAC GGCCCCCUUCU AA ACCACA CGGGAGGGGGCC CGAA GGGGGUAAA GGCACUG AACGCUCGAC
.......... ..(((((( ((.((((((((.. .(((( ((((((((((( .. ...... .))))))))))) )))) ...)))))) .)).))) .)))))....
>GPx.7.selenocysteine.esecis:def.2 chromosome:gi|371559183|gb|JH584650.1| strand:+ positions:3169169-3169265 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:490 distance_from_cds:46
CUGGAGGGGC ACGGCGUC AGCGCUUUACCGG GUGAC GGCCCCCUUCU AA ACCACA CGGGAGGGGGCC CGAA GGGGGUAAA GGCACUG AACGCUCGAC
.......... ..(((((( ((.((((((((.. .(((( ((((((((((( .. ...... .))))))))))) )))) ...)))))) .)).))) .)))))....

GPx.14.selenocysteine
gi|170696502|ref|ZP_02887627.1| Glutathione peroxidase [Burkholderia graminis C4D1M]
--------- SECIS ---------
>GPx.14.selenocysteine.esecis:str.1 chromosome:gi|371559395|gb|JH584438.1| strand:- positions:123050-123146 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:2699 distance_from_cds:2417
GUGGAGUCUU CCUAUCCG GCCCCA AUGAC GGCCUGCCUUA AA GCCAGCCUGCUGG UGAGGCAGACC CGAA AGCUUGGCG UGCAUCGG CAGGAAGAAG
......(((( (((.((.. (((((( .(((( ((.(((((((. .. (((((....)))) )))))))).)) )))) ....))).) .))...)) .)))))))..
>GPx.14.selenocysteine.esecis:str.2 chromosome:gi|371559395|gb|JH584438.1| strand:- positions:123050-123146 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:2699 distance_from_cds:2417
GUGGAGUCUU CCUAUCCG GCCCCA AUGAC GGCCUGCCUUA AA GCCAGCCUGCUGG UGAGGCAGACC CGAA AGCUUGGCG UGCAUCGG CAGGAAGAAG
......(((( (((.((.. (((((( .(((( ((.(((((((. .. (((((....)))) )))))))).)) )))) ....))).) .))...)) .)))))))..

MsrA
--------- SECIS ---------
>MsrA.3.cysteine.esecis:loosest.1 chromosome:gi|371559260|gb|JH584573.1| strand:+ positions:1789347-1789456 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:2740
GUGCUUGUUA AUUUCGG GAGAAAGCUUU UUGAA AGUUUGGCCC AG UAUAUUGCAAUAGGAGUAAAUAG GGGGUGUGACU GGAC UACCCGCCGC UUUGUGU AGCUACUGUU
..((((.((. .(....) .)).))))..( .(((( ((((..(((( .. (((.((((.......))))))). .))))..)))) )))) .)...((.(( .....)) .)).......
>MsrA.3.cysteine.esecis:loosest.2 chromosome:gi|371559260|gb|JH584573.1| strand:+ positions:1789347-1789456 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:2740
GUGCUUGUUA AUUUCGG GAGAAAGCUUU UUGAA AGUUUGGCCC AG UAUAUUGCAAUAGGAGUAAAUAG GGGGUGUGACU GGAC UACCCGCCGC UUUGUGU AGCUACUGUU
..((((.((. .(....) .)).))))..( .(((( ((((..(((( .. (((.((((.......))))))). .))))..)))) )))) .)...((.(( .....)) .)).......


Sel15
--------- SECIS ---------
>Sel15.1.selenocysteine.esecis:def.1 chromosome:gi|371559143|gb|JH584690.1| strand:- positions:203754-203852 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:776 distance_from_cds:569
AUUGUAAAAC AUGAAAGU AGGUGCACUUUA GUGAA GACUACAUAGA AA ACCUGUAAGG CAUGUGUAAGUC UGAU GUCAGGU GUACUUUA CACCAAGUGU
.((....)). ((....)) .(((((((((.( .(((( (((((((((.. .. ..((....)) ..))))).)))) )))) .).)))) )))))..( (((...))))
>Sel15.1.selenocysteine.esecis:def.2 chromosome:gi|371559143|gb|JH584690.1| strand:- positions:203754-203852 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:776 distance_from_cds:569
AUUGUAAAAC AUGAAAGU AGGUGCACUUUA GUGAA GACUACAUAGA AA ACCUGUAAGG CAUGUGUAAGUC UGAU GUCAGGU GUACUUUA CACCAAGUGU
.((....)). ((....)) .(((((((((.( .(((( (((((((((.. .. ..((....)) ..))))).)))) )))) .).)))) )))))..( (((...))))

Sel15.4.selenocysteine
BLAST_QUERY_MASTER
--------- SECIS ---------
>Sel15.4.selenocysteine.esecis:loosest.1 chromosome:gi|371559265|gb|JH584568.1| strand:- positions:357053-357161 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:110 distance_from_cds:62
AGACCAAGGA GCCUCCA GCCCUGGAGGUAA CUGAG UGGGUGAAGC CC AAGAACAUUGUAGAGUUUGGCCU CACCAGCUUG GGAG UGCCCUGCC UGAAGG AUCCUGGACC
...(((.((( .(((.(( (...(((.((((. .(((( (.(((((.(( .. ..((((........)))).)).) )))).....) )))) ))))))).) )).))) .))))))...
>Sel15.4.selenocysteine.esecis:loosest.2 chromosome:gi|371559265|gb|JH584568.1| strand:- positions:357053-357161 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:110 distance_from_cds:62
AGACCAAGGA GCCUCCA GCCCUGGAGGUAA CUGAG UGGGUGAAGC CC AAGAACAUUGUAGAGUUUGGCCU CACCAGCUUG GGAG UGCCCUGCC UGAAGG AUCCUGGACC
...(((.((( .(((.(( (...(((.((((. .(((( (.(((((.(( .. ..((((........)))).)).) )))).....) )))) ))))))).) )).))) .))))))...

SelH
--------- SECIS ---------
>SelH.2.selenocysteine.esecis:loose.1 chromosome:gi|371559183|gb|JH584650.1| strand:+ positions:2296469-2296571 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:2190 distance_from_cds:1959
UUGUGUGGAC UGGAGCA UCCAUGAGGAGGC AUGAU GAAGUGGGGG AA GGGGCCAAUGGCCAAACCUCA GUCAUGUCUC UGAA GCUG CAGCUCU UCCCACUGGG
..(((.(((. .(((((. (((....))).(( .(((( ((.((((((( .. ..((((...))))...))).. .))))...)) )))) ...) ).))))) ))))))....

SelI
--------- SECIS ---------
>SelI.1.selenocysteine.esecis:str.1 chromosome:gi|371559354|gb|JH584479.1| strand:- positions:1113315-1113408 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:1300 distance_from_cds:1252
UAUUUAAUGA AGAUUUGU GCUUGA AUGAA GAGCGCAGUCU AA ACCCAGACUCUGGAC AGGCUGCACUC GGAA GUGG GCAAGCAC AACGAAUGUU
.......... ....(((( (((((. .(((( (((.((((((( .. ..((((...)))).. ))))))).))) )))) .... .))))))) ))........


SelM
--------- SECIS ---------
>SelM.2.selenocysteine.esecis:str.1 chromosome:gi|371559437|gb|JH584396.1| strand:+ positions:217486-217585 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:580 distance_from_cds:319
UGUGUCAGGG CCCCCUGC CUGCAGGGACAGA AUGAA GCCCUCAGCUG AA AGCUCUGG GUGCUGAGGGU GGAU GAGCUGAGUC CCAGAGGG CACAGGGUCG
........(( (((..((( ((.(.(((((((. .(((( (((((((((.. .. ........ ..))))))))) )))) ...))..))) )).).))) ))..))))).

SelO
--------- SECIS ---------
>SelO.1.selenocysteine.esecis:def.1 chromosome:gi|371559328|gb|JH584505.1| strand:+ positions:7281241-7281339 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:312 distance_from_cds:306
UGAACAUCCA AAUGUAAC UGUUUUUAU GUGAC GACAAAAAUAAC AA AUCAGAAAUCUG AUAUAUUUUUGAC UGAU GAUGAA UUAACAGU ACUUAUUCCC
...((((... .)))).(( ((((((((( .(((( (.((((((((.. .. (((((....))) )).)))))))).) )))) .))))) ..)))))) ..........

SelP
--------- SECIS ---------
>SelP.1.uga_containing.esecis:def.1 chromosome:gi|371559382|gb|JH584451.1| strand:+ positions:8573360-8573458 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:289 distance_from_cds:280
UUCUCUCCUA AUAUUCUG CUUGCAUUA GUGAG GACAGAAGCAU AA ACUAUAACCUA GGGGCUUCUGUU UGAU AUUUAGCAAC CAAGAAU AGAAGAAAGC
..((.((.(. .((((((. .((((...( .(((( (((((((((.. .. .(((.....)) )..))))))))) )))) .)...)))). ..))))) ).).)).)).
>SelP.1.uga_containing.esecis:def.2 chromosome:gi|371559382|gb|JH584451.1| strand:+ positions:8574061-8574152 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:990 distance_from_cds:981
GUGAAUGCUU UGAAAGCA CAUGCCAUAGUUA AUGAU GGUUUAAUAGGG AA ACUGU CUCCUACAAAACC UGAA UCC UUUUAUG GUGAAUGCUA
.....((((( ...))))) ...(((((((... .(((( (((((..((((( .. ..... .)))))..))))) )))) ... ..))))) ))........

SelPb
--------- SECIS ---------
>SelP.5.selenocysteine.esecis:str.1 chromosome:gi|371559093|gb|JH584740.1| strand:+ positions:3876508-3876610 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:1013 distance_from_cds:527
UCCCCGGAUC CCGCCUGU CCGCGCUCA AUGAA GCCCGUGGCGC AA ACCGGGCUCUCCCGG UCACCACGGGC CGAC GCUGCGCAGA AAAGCGCG UCAGGGGAGC
(((((.(((. .(((.(.( (.((((... .(((( ((((((((... .. ((((((....))))) )..)))))))) )))) ...)))).)) .).))).) )).)))))..

SelR1
--------- SECIS ---------
>SelR.2.selenocysteine.esecis:str.1 chromosome:gi|371559291|gb|JH584542.1| strand:+ positions:5331075-5331168 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:2796 distance_from_cds:2757
CUGCUAUUUU CUGGUCUG GGAUCAUGGU AUGAA UUGCCCUAGGU AA ACCCUUCCAGGAU GGUUAGGGUAA GGAU GUU UGGAUGA UCCUACCAGA
.........( (((((..( (((((((((. .(((( (((((((((.. .. (.(((...))).) ..))))))))) )))) ..) )..)))) ))))))))))

SelR3
--------- SECIS ---------
>SelR.5.cysteine.esecis:loosest.1 chromosome:gi|371559175|gb|JH584658.1| strand:- positions:5335747-5335846 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:2050
AGCCCUACGG GAGGCCU GGCCUCGAGAUCA GUGAU CUGGCAUCCUUG CC CCAUUCCUGUA UGGGGAGGCCC AGAA GGCCUACC AUGAUCU GCCUGAAGAG
.......... (((((.. .))))).(((((( .(((( ..(((.(((((. .. ........... .))))).))). )))) ((....)) .)))))) ..........

SelS
--------- SECIS ---------
>SelS.3.selenocysteine.esecis:str.1 chromosome:gi|371559184|gb|JH584649.1| strand:+ positions:641549-641649 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:833 distance_from_cds:830
AUAGAUGAGU CUCUGUGA CAAGCUGCAGUGA AUGAU GUUGUCCUUAU AA AUGGUAAACAAACCA GUGAGGAUCAC UGAU AAUA GACAGUAG AUGGGGGUUU
........(( (.....)) )..(((((.((.. .(((( ((.(((((((( .. .((((......)))) )))))))).)) )))) .)). ).)))).. ..........

SelU3
--------- SECIS ---------
>SelU.1.cysteine.esecis:loosest.1 chromosome:gi|371559226|gb|JH584607.1| strand:+ positions:1278873-1278976 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:2067
AGCUCUCCAA GGAGUGG GUAGAACAGUUAC UUGAC UACCCACACAC AG UAGUAGUCGGGCGGGGGGCA GUGUGUGUGUG UGAC UGUG UUAGUCU UAUCCAAAAA
.(((((.... )))))(( ((((.((.(.((( .(((( (((.((((((( .. ..((..((.....))..)). ))))))).))) )))) .))) .).)).) ))))).....

SelU2
--------- SECIS ---------
>SelU.11.cysteine.esecis:loosest.1 chromosome:gi|371559069|gb|JH584764.1| strand:+ positions:195745-195853 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:2439
UCUGUGUCCG UUCAGUC UUUUGCCUCUCUA CUGAG ACUACACCAA AG UAAUCAGCGAGGGCCAAGUUCAGUG GUUGUUAAGU AGAC ACUAGU UUACUAG AAACUGAACU
.........( ((((((. (((.......((( .(((( (((((((((. .. ......((....)).........)) ).)))..))) )))) ..))). .....)) ).))))))).

SelU1
--------- SECIS ---------
>SelU.19.cysteine.esecis:def.1 chromosome:gi|371559207|gb|JH584626.1| strand:- positions:597634-597728 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:None distance_from_cds:211
UUCUACUAGU UUUUUGUC UCUUACCGCAUUA AUGAA AGGCUGGGCCC AA AAUCUUAA GGCGUAACCU AGAU GGGUCC AGUUAGAG CCAGAAAAAU
.........( ((((((.( (((.((.(.(((. .(((( (((.((.(((. .. ........ ))).)).))) )))) .))).) .)).)))) .)))))))..

SelW1
--------- SECIS ---------
>SelW.4.selenocysteine.esecis:str.1 chromosome:gi|371558889|gb|JH584944.1| strand:+ positions:862196-862291 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:1516 distance_from_cds:1300
CUUGGUUCAA CUCGGCCG AGCGCUUG AUGAC GGGAGUUGCCG AA AUGUCCCCUGACGCG UGGCCGUUCCC AGAA GUUU UUGCGCAG GAUGCCGGUU
........(( (.((((.. .((((... .(((( ((((.(.(((( .. .((((....)))).. )))).).)))) )))) .... ..)))).. ...)))))))

SPS2
--------- SECIS ---------
>SPS.11.selenocysteine.esecis:def.1 chromosome:gi|371559405|gb|JH584428.1| strand:- positions:349067-349171 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:1716 distance_from_cds:561
UGUGGCUGGA CAUGUGCC CUUCCUCUCUUUA AUGAA GCUCUUCCCCUU AA ACCCACCCUGG GGCUAGGAGGAGU CGAG GACCCCCAGA GGGCAGG GCACCAGCUC
...((((((. ....(((( ((((((((..... .(((( ((((((((.... .. .((((...))) )....)))))))) )))) .......))) ))).))) ))))))))).

TR3
--------- SECIS ---------
>TR.11.selenocysteine.esecis:loosest.1 chromosome:gi|371559298|gb|JH584535.1| strand:+ positions:4183030-4183121 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:218 distance_from_cds:215
CUUGCUUGGA AGUGGCA CGUAAGUGCUUUU UUGAA GUUUUGGCUC AG AACCCCAUUCU GAGGUGAGCU ACGAC UGA UGACUU AUCUUGCAAA
.((((..((( ((((((( (....))))).(( .(((( ....(((((( .. .(((.((...) ).)))))))) ))))) .)) ..))). .))).)))).
>TR.11.selenocysteine.esecis:loosest.2 chromosome:gi|371559298|gb|JH584535.1| strand:+ positions:4185701-4185807 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:2889 distance_from_cds:2886
UCUCUGUCAU GCUGUAU GUUAGGAAGCAUC AUGAA AGACAUGGCA AG UGGGGAUUGUCAAAAUACUCUAG UGGCAGGUUU GGGAG CUUCA CUUGUGC UCUGCUAGAU
.....(((.. ((.(((( (....((((.... .(((( ((((...((. .. ((((((((.....))).))))). ..))..)))) .)))) )))). ..))))) ...))..)))

TR1
--------- SECIS ---------
>TR.22.selenocysteine.esecis:str.1 chromosome:gi|371559116|gb|JH584717.1| strand:+ positions:1163630-1163724 species:"Chrysemys picta bellii" target:/cursos/BI/genomes/project_2013/Chrysemys_picta_bellii/genome.fa distance_from_sec_uga:248 distance_from_cds:245
UGGCAAGGCA UCUACAGG AUGCUUCC AUGAU GUCGCAGCCUA AA CCCAGUAUUUUCUGG UAGGCAGCGAU GGAA GAA CUGCUGGC ACAGUUUGAG
.((..((((( (((...)) )))))))) .(((( (((((.((((( .. .((((......)))) ))))).))))) )))) ((( (((..... .))))))...


