genewise output
Score 298.24 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000010_1.0   46 SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEP 
                     SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFG QEP 
                     SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGHQEP 
gi|357434150|-150580 tgtcggaggagtgtagcctcgccccccgcgccctagcgtctactgccgc 
                     ctctttatcgaggtcaaaagctaatagatgcaatattctcgaatgaaac 
                     ggcaggtgccgtccatgccatggggggcgtcccccgccccccgtctggt 


SPP00000010_1.0   95 DSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAF               
                     D NKEIESFARRTYSVSFPMF+KIAVT TGA+PAF               
                     DGNKEIESFARRTYSVSFPMFTKIAVTSTGAYPAF               
gi|357434150|-150433 ggaagagatgccatagttcataaaggaaaggtcgt               
                     agaaatagtcggcagtctcttcatctcgcgcacct               
                     cccggtgctcccccccaccgtcgtacctttcttcc               


SPP00000010_1.0  130                           YLAQTSGKEPTWNFWKYLVAPDG 
                                                   TSGKEPTWN+WKYLVAPDG 
                                K:K[aaa]       ---ETSGKEPTWNLWKYLVAPDG 
gi|357434150|-150328 AAGTACCTG  Intron 1   CAGA   gatgagcatattatcggcgg 
                       <2-----[150326:15016-2>    accgaaccgatgaattccag 
                                                  gttgggccgcggactacata 


SPP00000010_1.0  154 KVVGAWDPTVSVEEVRPQITALVRKLILLKREDL                
                     KVVGAWDPTVSVEE+RPQITALVRKLIL KREDL                
                     KVVGAWDPTVSVEEIRPQITALVRKLILRKREDL                
gi|357434150|-150101 aggggtgcagtgggaaccaagcgaacaccacggt                
                     attgcgacctctaatgcatccttgatttgagaat                
                     ggagtgcacgcgggcacgcaatgggccaggaaca                


//
Making a K in phase 2 intron
>gi|357434150|gb|JH378213.1|:subseq(15028,300580).pep
SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGHQEPDGNKEIESFAR
RTYSVSFPMFTKIAVTSTGAYPAFKETSGKEPTWNLWKYLVAPDGKVVGAWDPTVSVEEI
RPQITALVRKLILRKREDL
//
>gi|357434150|gb|JH378213.1|:subseq(15028,300580).[150580:149998].sp
TCGGTGTCCCTAGTGGTGAATGTGGCCAGCGAGTGTGGCTTCACAGATCAGCACTACCGA
GCTCTGCAGCAGCTGCAGCGGGACCTGGGTCCCCACCACTTCAACGTGCTCGCCTTCCCC
TGCAACCAGTTTGGCCATCAGGAGCCTGACGGCAACAAGGAGATTGAGAGCTTTGCCCGC
CGCACCTACAGCGTCTCATTCCCCATGTTTACCAAGATTGCAGTCACCAGTACTGGTGCC
TATCCTGCCTTCAAAGAGACTTCTGGGAAGGAGCCCACCTGGAACTTGTGGAAATACCTT
GTAGCCCCAGATGGAAAGGTGGTAGGGGCTTGGGACCCAACCGTGTCCGTGGAGGAGATC
AGACCCCAGATCACAGCACTTGTGAGGAAGCTCATCCTACGGAAGCGAGAAGACTTA
//
gi|357434150|gb|JH378213.1|:subseq(15028,300580)	GeneWise	match	150580	150000	300.23	-	.	gi|357434150|gb|JH378213.1|:subseq(15028,300580)-genewise-prediction-1
gi|357434150|gb|JH378213.1|:subseq(15028,300580)	GeneWise	cds	150580	150327	0.00	-	0	gi|357434150|gb|JH378213.1|:subseq(15028,300580)-genewise-prediction-1
gi|357434150|gb|JH378213.1|:subseq(15028,300580)	GeneWise	intron	150326	150163	0.00	-	.	gi|357434150|gb|JH378213.1|:subseq(15028,300580)-genewise-prediction-1
gi|357434150|gb|JH378213.1|:subseq(15028,300580)	GeneWise	cds	150162	150000	0.00	-	1	gi|357434150|gb|JH378213.1|:subseq(15028,300580)-genewise-prediction-1
//