genewise output
Score 990.55 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000034_1.0    1 MNGPEDLPKSYDYDLIIIGGGSGGLAAAK----                 
                     MNGPEDLP+SYDYDLIIIGGGSGGLAAAK                     
                     MNGPEDLPESYDYDLIIIGGGSGGLAAAKARLL                 
gi|357434224|g145129 aagcggccgttgtgcaaagggtggcgggagacc                 
                     tagcaatcacaaaattttgggcggtcccacgtt                 
                     gtctgtttgctctctcctatccacgattgagct                 


SPP00000034_1.0   30                        EAAQYGKKVMVLDFVTPTPLGTRW   
                                            EAAQYGKKVMVLDFVTPTPLGTRW   
                                            EAAQYGKKVMVLDFVTPTPLGTRW   
gi|357434224|g145228 GTGTTAG  Intron 1   CAGgggctgaagagcgtgacaccgaat   
                     <0-----[145228:14763-0>accaagaattttattcccctgcgg   
                                            aacatcggggcgctctccttatag   


SPP00000034_1.0   54                           LGGTCVNVGCIPKKLMHQAALLG 
                                               LGGTCVNVGCIPKKLMHQAALLG 
                               G:G[ggt]        LGGTCVNVGCIPKKLMHQAALLG 
gi|357434224|g147711 GGTGAGCT  Intron 2   TAGGTcggatgaggtacaacaccggttg 
                      <1-----[147712:15000-1>  tggcgtatggtcaattaaccttg 
                                               caaatgtgtcataaggcactaaa 


SPP00000034_1.0   78 QALQDSRNYGWKVEET                          KHDWDRM 
                     QALQDSRNYGWKVEET                          KHDWDRM 
                     QALQDSRNYGWKVEET          V:V[gtt]        KHDWDRM 
gi|357434224|g150072 cgccgtcatgtagggaGGTACAGG  Intron 3   CAGTTacgtgaa 
                     actaacgaaggataac <1-----[150121:15310-1>  aaagagt 
                     acaactactagacgga                          gttgcag 


SPP00000034_1.0  102 IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK          
                     IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK          
                     IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK          
gi|357434224|g153125 agggcacagttatgtcggccgaaggtgagtgctagccaaa          
                     tactaaatgctaggagtctgaaattaaacagattgcagta          
                     aatagtctctgtgccaatggggacctgttcgattttcgtg          


SPP00000034_1.0  142                        ATNNKGKEKIYSAERFLIATGERPRY 
                                            ATNNKGKEKIYSAERFLIATGERPRY 
                                            ATNNKGKEKIYSAERFLIATGERPRY 
gi|357434224|g153245 GTAATTG  Intron 4   TAGgaaaagagaattggatcagaggacct 
                     <0-----[153245:15364-0>ccaaagaaataccagtttccgagcga 
                                            aattacaagttaagatctcttaaatc 


SPP00000034_1.0  168 LGIPGDKEYCIS                          DDLFSLPYCPG 
                     LGIPGDKEYCIS                          DDLFSLPYCPG 
                     LGIPGDKEYCIS           S:S[agt]       DDLFSLPYCPG 
gi|357434224|g153722 tgacggagttaaAGGTAAAGA  Intron 5   CAGTggctttcttcg 
                     tgtcgaaaagtg  <2-----[153760:15621-2> aattctcagcg 
                     gccttcaacccc                          tttccatccgg 


SPP00000034_1.0  192 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 
                     KTL+VGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 
                     KTLIVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 
gi|357434224|g156250 aacagggttggtgtggtcggagtggagagataccagtgcgagaaaggca 
                     actttgccatctagcgttcgtgtatctttgctttggtaaatcaatgaat 
                     gccctaactttgattattttctatcttgtgctttaatcgcgccattacg 


SPP00000034_1.0  241 EEHGIKFIRQFVPIK                       VEQIEAGTPGR 
                     EEHGIKFIRQFVPIK                       VEQIEAGTPGR 
                     EEHGIKFIRQFVPIK                       VEQIEAGTPGR 
gi|357434224|g156397 ggcgaataactgcaaGTAAGTG  Intron 6   CAGggcagggacgc 
                     aaagtattgattcta<0-----[156442:15950-0>taatacgccgg 
                     gatccgtaagtgata                       taataagaaca 


SPP00000034_1.0  267 LRVVAQSTNSEEIIEGEYNT                       VMLAIG 
                     LRVVAQSTNSEEIIEGEYNT                       V+LAIG 
                     LRVVAQSTNSEEIIEGEYNT                       VLLAIG 
gi|357434224|g159539 ccgggctaaaggaagggtaaGTAAGGA  Intron 7   CAGgttgag 
                     tgttcaccagaattagaaac<0-----[159599:16110-0>tttctg 
                     ctaatggcttgactaagttg                       gggaaa 


SPP00000034_1.0  293 RDACTRKIGLETVGVKINE                          TGKI 
                     RDACTRKIGLETVGVKINE                          TGKI 
                     RDACTRKIGLETVGVKINE           K:K[aag]       TGKI 
gi|357434224|g161128 aggtaaaagtgagggaaagAAGTAAGAA  Intron 8   CAGGagaa 
                     gacgcgatgtactgtataa  <2-----[161187:16186-2> cgat 
                     attcaaatcaacagggata                          taaa 


SPP00000034_1.0  317 PVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK  
                     PVTDEEQTNVPYIYAIGDILE KVELTPVAIQAGRLLAQRLYAGSTVK  
                     PVTDEEQTNVPYIYAIGDILEGKVELTPVAIQAGRLLAQRLYAGSTVK  
gi|357434224|g161883 cgagggcaagctatgaggatggaggcacggacggctcgcactggtaga  
                     ctcaaaacatcatactgattagatatcctctacggttcagtacgccta  
                     tcataggctgtcctctttaggtgggtcatacgaaaggtggctatcttg  


SPP00000034_1.0  365                        CDYENVPTTVFTPLEYGACGLSEEKA 
                                            CDYENVPTTVFTPLEYGACGLSEEKA 
                                            CDYENVPTTVFTPLEYGACGLSEEKA 
gi|357434224|g162027 GTGAGTG  Intron 9   CAGtgtgagcaagtactgtggtgctggag 
                     <0-----[162027:16255-0>gaaaatcccttcctaagcggtcaaac 
                                            tctattgctatttgatactcttggat 


SPP00000034_1.0  391 VEKFGEENIE                       VYHSYFWPLEWTIPSR 
                     VEKFGEENIE                       VYHSYFWPLEWTIPSR 
                     VEKFGEENIE                       VYHSYFWPLEWTIPSR 
gi|357434224|g162631 ggatgggaagGTGATTT  Intron 10  TAGgtcatttctgtaacta 
                     taatgaaata<0-----[162661:16478-0>taagatgctagctccg 
                     gggtgggttg                       tcttctgagaggtaaa 


SPP00000034_1.0  417 DNNKCYAKIICNTKDN                       ERVVGFHVLG 
                     DNNKCYAKIICNTKDN                       ERVVGFHVLG 
                     DNNKCYAKIICNTKDN                       ERVVGFHVLG 
gi|357434224|g164833 gaaattgaaataaagaGTAAGTG  Intron 11  TAGgcgggtcgcg 
                     aaaagacattgacaaa<0-----[164881:16912-0>agttgtattg 
                     tccattaaactttact                       attgctcagt 


SPP00000034_1.0  443 PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE               
                     PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE               
                     PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE               
gi|357434224|g169154 caggggacgtgggcatgcaaaccgaaagaccgtgg               
                     cacgatcagtccctaggtcaaatagctgtactgca               
                     attaataaccatagatagcaaggccatacctctag               


SPP00000034_1.0  478                        VFTTLSVTKRSGASILQAGC       
                                            VFTTLSVTKRSGASILQAGC       
                                            VFTTLSVTKRSGASILQAGC       
gi|357434224|g169259 GTAAGTT  Intron 12  CAGgtaactgaactggaaccggt       
                     <0-----[169259:17859-0>ttcctctcagcgcgttacgg       
                                            acaactgcactgaccggtcc       


//
Making a G in phase 1 intron
Making a V in phase 1 intron
Making a S in phase 2 intron
Making a K in phase 2 intron
>gi|357434224|gb|JH378139.1|:subseq(10382837,319261).pep
MNGPEDLPESYDYDLIIIGGGSGGLAAAKARLLEAAQYGKKVMVLDFVTPTPLGTRWGLG
GTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGY
RVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY
CISSDDLFSLPYCPGKTLIVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKI
GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVLLAIGRDAC
TRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKVELTPVAIQAGRLLAQR
LYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSR
DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCA
EVFTTLSVTKRSGASILQAGC
//
>gi|357434224|gb|JH378139.1|:subseq(10382837,319261).[145129:178658].sp
ATGAATGGCCCTGAGGATCTTCCTGAGTCCTATGACTATGACCTTATCATCATTGGAGGT
GGCTCCGGAGGCCTGGCAGCTGCTAAGGCAAGGCTCCTTGAAGCAGCCCAATATGGCAAG
AAGGTGATGGTCCTGGACTTTGTCACTCCCACCCCTCTTGGAACTAGATGGGGTCTCGGA
GGAACATGTGTGAATGTGGGTTGCATACCTAAAAAACTGATGCACCAAGCCGCTTTATTA
GGACAAGCCCTACAAGACTCTCGAAACTATGGATGGAAAGTCGAGGAGACAGTTAAGCAT
GATTGGGACAGAATGATAGAAGCTGTACAGAATCACATTGGCTCTTTGAATTGGGGCTAC
CGAGTAGCTCTGCGGGAGAAGAAAGTCGTCTATGAGAATGCTTACGGGCAATTTATTGGT
CCTCACAGGATTAAGGCAACAAATAATAAAGGCAAAGAAAAGATTTATTCAGCAGAGAGA
TTTCTCATTGCCACTGGTGAAAGACCACGTTACTTGGGCATCCCTGGTGACAAAGAATAC
TGCATCAGCAGTGATGATCTTTTCTCCTTACCTTACTGCCCGGGGAAGACCCTCATCGTT
GGAGCATCCTATGTTGCTTTGGAATGTGCTGGATTTCTTGCTGGTATCGGTTTAGATGTC
ACTGTTATGGTTAGGTCCATTCTTCTTAGAGGATTTGACCAGGACATGGCCAACAAAATT
GGTGAACACATGGAGGAACATGGCATCAAGTTTATAAGACAGTTTGTGCCAATTAAAGTT
GAACAAATTGAAGCAGGGACACCAGGCCGACTCCGTGTAGTAGCTCAGTCGACCAATAGT
GAGGAAATCATTGAAGGAGAGTATAATACGGTGTTGTTGGCAATAGGAAGAGATGCTTGC
ACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAAGATAAATGAAAAGACTGGAAAAATA
CCTGTCACAGATGAAGAGCAGACCAATGTGCCTTACATCTATGCCATTGGTGATATATTG
GAGGGTAAGGTGGAGCTTACCCCAGTTGCAATCCAGGCAGGACGATTGCTGGCTCAGAGG
CTCTATGCAGGTTCCACTGTTAAGTGTGACTATGAAAATGTTCCGACCACTGTATTTACT
CCTTTGGAATATGGAGCCTGTGGCCTTTCTGAGGAGAAAGCTGTGGAGAAGTTTGGGGAG
GAGAATATTGAGGTTTACCATAGTTACTTTTGGCCATTGGAATGGACGATTCCATCAAGA
GATAACAACAAATGTTATGCAAAAATAATCTGTAATACTAAAGACAATGAACGTGTTGTG
GGCTTTCACGTACTGGGTCCAAATGCTGGAGAAGTTACACAAGGCTTCGCAGCTGCACTG
AAATGTGGACTGACCAAAAAACAGCTGGACAGCACAATTGGAATCCACCCTGTCTGTGCA
GAGGTATTCACAACACTCTCTGTGACCAAACGCTCTGGGGCAAGCATCCTGCAGGCTGGC
TGC
//
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	match	145129	178658	993.55	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	145129	145227	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	145228	147638	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	147639	147711	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	147712	150000	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	150001	150120	0.00	+	2	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	150121	153101	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	153102	153244	0.00	+	2	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	153245	153643	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	153644	153759	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	153760	156215	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	156216	156441	0.00	+	1	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	156442	159505	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	159506	159598	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	159599	161109	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	161110	161186	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	161187	161869	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	161870	162026	0.00	+	1	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	162027	162552	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	162553	162660	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	162661	164784	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	164785	164880	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	164881	169123	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	169124	169258	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	intron	169259	178598	0.00	+	.	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
gi|357434224|gb|JH378139.1|:subseq(10382837,319261)	GeneWise	cds	178599	178658	0.00	+	0	gi|357434224|gb|JH378139.1|:subseq(10382837,319261)-genewise-prediction-1
//