genewise output
Score 305.19 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000022_1.0   41 QAGGGGPGTGPGLGEAGSLA                          CEL 
                     + GG GP T  GLG     A                          CEL 
                     ERGGRGPQTWKGLGRGVGGA          T:G[ggg]        CEL 
gi|357434219|g140560 gcggagccatagcgcgggggGGTGGGAA  Intron 1   CAGGGtgc 
                     agggggcacgagtgggtggc <1-----[140621:14999-1>  gat 
                     ggaaagggcggcgacagaaa                          tgg 


SPP00000022_1.0   65 PLAKSEWQKKLTPEQFYVTREKGTEP                        
                     PLAKSEWQKKLTPEQFYVTREKGTEP                        
                     PLAKSEWQKKLTPEQFYVTREKGTEP                        
gi|357434219|g150009 ccgaagtcaacacgcttgaagagagcGTAAGCT  Intron 2   CAG 
                     ctcagagaaatccaatatcgaagcac<0-----[150087:15299-0> 
                     ttcgtggagaacagaccccaagagag                        


SPP00000022_1.0   91 PFSGIYLNNKEAGMYHCVCCDSPLF                         
                     PFSGIYLNNKEAGMYHCVCCDSPLF                         
                     PFSGIYLNNKEAGMYHCVCCDSPLF           S:S[agt]      
gi|357434219|g153000 ctagatcaaagggatctgttgacctAGGTAAGAT  Intron 3      
                     ctggtataaaacgtaagtggagctt  <2-----[153077:161398  
                     tctgccgtcgaaagcccactttacc                         


SPP00000022_1.0  116     SEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEV 
                         SEKKYCS TGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEV 
                         SEKKYCSHTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEV 
gi|357434219|g161396 CAGTtgaatttcagtctttggcgatgtggacagacaccgattgtgcagg 
                     -2> caaaagcacggcctcacagccgcaagacgttggtacctgccgcat 
                         tgagcccctggtgttgtttatcttaccagcgatgccggactcagc 


SPP00000022_1.0  162 VCKQ                       CEAHLGHVFPDGPGPNGQRFCI 
                     VCKQ                       CEAHLGHVFPDGPGPNGQRFCI 
                     VCKQ                       CEAHLGHVFPDGPGPNGQRFCI 
gi|357434219|g161535 gtacGTGAGAT  Intron 4   CAGtggccgcgtcggcgcagcatta 
                     tgaa<0-----[161547:16282-0>gacatgattcagcgcagagtgt 
                     ccgg                       tattttcgtttatgcctggtcc 


SPP00000022_1.0  188 NSVALKFKPRK                                       
                     NSVALKFKPRK                                       
                     NSVALKFKPRK                                       
gi|357434219|g162889 aaggcatacaa                                       
                     agtctatacga                                       
                     ccgtggcacga                                       


//
Making a G in phase 1 intron
Making a S in phase 2 intron
>gi|357434219|gb|JH378144.1|:subseq(14653179,312921).pep
ERGGRGPQTWKGLGRGVGGAGCELPLAKSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNK
EAGMYHCVCCDSPLFSSEKKYCSHTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTE
VVCKQCEAHLGHVFPDGPGPNGQRFCINSVALKFKPRK
//
>gi|357434219|gb|JH378144.1|:subseq(14653179,312921).[140560:162921].sp
GAGCGGGGAGGAAGAGGGCCGCAGACCTGGAAGGGCCTGGGACGCGGAGTGGGAGGAGCA
GGGTGTGAGCTGCCTCTTGCCAAGAGTGAGTGGCAAAAGAAACTAACCCCAGAGCAATTC
TACGTCACCAGAGAAAAGGGAACGGAACCGCCTTTCAGTGGGATCTACCTGAATAACAAG
GAAGCAGGAATGTACCACTGCGTATGCTGTGATAGTCCACTCTTCAGTTCTGAGAAAAAG
TACTGCTCCCACACTGGGTGGCCTTCGTTTTCTGAGGCTCATGGTACATCTGGCTCTGAT
GAAAGCCACACAGGGATCCTGAGACGTCTGGACACCTCGTTGGGATCCGCTCGCACAGAG
GTCGTCTGCAAGCAGTGTGAAGCTCATCTTGGTCACGTGTTTCCTGATGGACCTGGGCCC
AACGGTCAGAGGTTTTGCATCAACAGCGTGGCTCTGAAGTTCAAACCCAGGAAA
//
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	match	140560	162921	305.19	+	.	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	cds	140560	140620	0.00	+	0	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	intron	140621	149997	0.00	+	.	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	cds	149998	150086	0.00	+	2	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	intron	150087	152999	0.00	+	.	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	cds	153000	153076	0.00	+	0	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	intron	153077	161398	0.00	+	.	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	cds	161399	161546	0.00	+	1	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	intron	161547	162822	0.00	+	.	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
gi|357434219|gb|JH378144.1|:subseq(14653179,312921)	GeneWise	cds	162823	162921	0.00	+	0	gi|357434219|gb|JH378144.1|:subseq(14653179,312921)-genewise-prediction-1
//