Command line: [exonerate -m p2g --showtargetgff -q ./proteins/SPP00000030_1.0.fa -t ./exonerate/SPP00000030_1.0_1_genomic.fa_exonerate.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000030_1.0 # Protein # Selenoprotein W1 (SelW1) # Homo sapiens # Complete
        Target: gi|357434165|gb|JH378198.1|:subseq(6308628,300122) Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00094, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 250
   Query range: 30 -> 86
  Target range: 149999 -> 150167

     31 : ProGlyArgLeuAspIleCysGlyGluGlyThrProGlnAlaThrGlyPhePheGluV :     50
          |||||| !!||||||||| ! ||||||||||||||| !!! !||||||||||||||||
          ProGlyCysLeuAspIleGlyGlyGluGlyThrPro***AspThrGlyPhePheGluV
 150000 : CCCGGCTGCCTGGACATTGGAGGCGAGGGAACTCCCTAGGACACTGGGTTCTTTGAAG : 150057

     51 : alMetValAlaGlyLysLeuIleHisSerLysLysLysGlyAspGlyTyrValAspTh :     69
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          alMetValAlaGlyLysLeuIleHisSerLysLysLysGlyAspGlyTyrValAspTh
 150058 : TAATGGTAGCCGGGAAGTTGATTCACTCTAAGAAGAAAGGCGATGGCTACGTGGACAC : 150114

     70 : rGluSerLysPheLeuLysLeuValAlaAlaIleLysAlaAlaLeuAlaGln :     86
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
          rGluSerLysPheLeuLysLeuValAlaAlaIleLysAlaAlaLeuAlaGln
 150115 : AGAAAGCAAGTTTCTGAAGCTGGTGGCCGCCATCAAAGCTGCCTTGGCTCAG : 150167

vulgar: SPP00000030_1.0 30 86 . gi|357434165|gb|JH378198.1|:subseq(6308628,300122) 149999 150167 + 250 M 56 168
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-11-14
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|357434165|gb|JH378198.1|:subseq(6308628,300122)	exonerate:protein2genome:local	gene	150000	150167	250	+	.	gene_id 1 ; sequence SPP00000030_1.0 ; gene_orientation .
gi|357434165|gb|JH378198.1|:subseq(6308628,300122)	exonerate:protein2genome:local	cds	150000	150167	.	+	.	
gi|357434165|gb|JH378198.1|:subseq(6308628,300122)	exonerate:protein2genome:local	exon	150000	150167	.	+	.	insertions 0 ; deletions 0
gi|357434165|gb|JH378198.1|:subseq(6308628,300122)	exonerate:protein2genome:local	similarity	150000	150167	250	+	.	alignment_id 1 ; Query SPP00000030_1.0 ; Align 150000 31 168
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis