TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000008_1.0 # Protein # Glutathione peroxidase 5 (GPx5) #
Homo sapiens # Complete
         (221 letters)

Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome.f
a 
           2685 sequences; 2,608,572,064 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH378119.1| Saimiri boliviensis boliviensis unplaced genomic ...   143   7e-33
gb|JH378329.1| Saimiri boliviensis boliviensis unplaced genomic ...   140   4e-32
gb|JH378152.1| Saimiri boliviensis boliviensis unplaced genomic ...   129   8e-29
gb|JH378190.1| Saimiri boliviensis boliviensis unplaced genomic ...   116   9e-25
gb|JH378115.1| Saimiri boliviensis boliviensis unplaced genomic ...   106   9e-22
gb|JH378166.1| Saimiri boliviensis boliviensis unplaced genomic ...   104   3e-21
gb|JH378112.1| Saimiri boliviensis boliviensis unplaced genomic ...   101   2e-20
gb|JH378108.1| Saimiri boliviensis boliviensis unplaced genomic ...    64   7e-09
gb|JH378213.1| Saimiri boliviensis boliviensis unplaced genomic ...    60   1e-07
gb|JH378120.1| Saimiri boliviensis boliviensis unplaced genomic ...    54   5e-06

>gb|JH378119.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00015,
                whole genome shotgun sequence
          Length = 36383700

 Score =  143 bits (360), Expect = 7e-33
 Identities = 80/162 (49%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
 Frame = -2

Query: 61       GKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGL 119
                GK +L  NVA+  G T + Y ++N LQ  L P GLVVL FP N FG QE   N+EIL  L
Sbjct: 21100364 GKGLLIENVASL*GPTVRAYTQMNELQRRLGPRGLVVLSFPGNPFGPQENAKNEEILNSL 21100185

Query: 120      KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE----ILGTFKSISWDPVK 175
                KYV PGGGF P+F LFEK +V G     +F+FL+ + P PS+    ++   K I+  PV 
Sbjct: 21100184 KYV*PGGGFEPNFMLFEKCEVKGAGSHPLFAFLREALPAPSDDATALMTDPKLIT*SPVC 21100005

Query: 176      VHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217
                 +D+ WNFEKFLVGPDG+PV R+S R      + DI A L Q
Sbjct: 21100004 RNDVAWNFEKFLVGPDGVPVRRYSRRFQTIDKEPDIKALLSQ 21099879


>gb|JH378329.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00225,
              whole genome shotgun sequence
          Length = 700218

 Score =  140 bits (353), Expect = 4e-32
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = -2

Query: 150    SFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKT 209
              S L HSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSH+ATVS VK 
Sbjct: 105455 SLL*HSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHQATVSLVKA 105276

Query: 210    DILAYLKQFKTK 221
              DI AYLKQF+TK
Sbjct: 105275 DIEAYLKQFRTK 105240



 Score =  103 bits (256), Expect = 8e-21
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = -2

Query: 29     KMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNA 84
              +MDCH+D+KGTIYDYEAI LNK EYV FK+YVGKH+LFVNVATYCGLTAQYP  N+
Sbjct: 109826 QMDCHRDQKGTIYDYEAIMLNKKEYVPFKRYVGKHVLFVNVATYCGLTAQYPGKNS 109659



 Score =  102 bits (255), Expect = 1e-20
 Identities = 44/67 (65%), Positives = 56/67 (83%)
 Frame = +3

Query: 150    SFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKT 209
              S L+++CP  S++LG+   + W+P+KVHDIRWNFEKFLVGP G+PVMRW HR  VS+VK+
Sbjct: 135570 SVLQNACPPTSDLLGSSNQLFWEPMKVHDIRWNFEKFLVGPHGVPVMRWFHRIPVSTVKS 135749

Query: 210    DILAYLK 216
              DILAYLK
Sbjct: 135750 DILAYLK 135770



 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 44/60 (73%), Positives = 48/60 (80%), Gaps = 3/60 (5%)
 Frame = -3

Query: 81     ELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYV---RPGGGFVPSFQLFEK 137
              ELNALQEELKP+GLVVLGFPCNQFGKQEPGDNKEILPGLK V    P GG    F+  ++
Sbjct: 107635 ELNALQEELKPFGLVVLGFPCNQFGKQEPGDNKEILPGLK*VPA*NPTGGACVPFRSLQR 107456



 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = +3

Query: 28     MKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQE 87
              +++DC+ +  GTIY+Y A  L+   Y+ FKQ+ GK ILFVNVATYCGLTAQYP  N+   
Sbjct: 128745 LQVDCNNNVTGTIYEYGAFTLSGEGYIQFKQFAGKPILFVNVATYCGLTAQYPGKNS--- 128915

Query: 88     ELKPYGLVVLGFPCN 102
                  +G      PC+
Sbjct: 128916 HFNSFGSRTAS*PCS 128960



 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 115    ILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS 155
              I+   +YVRPGGGFVP+FQLFEKGDVNGEKEQKVFSFLK S
Sbjct: 107116 IMACCRYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKVS 106994



 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 81     ELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 120
              ELNALQEELK  G++VLGFPCNQFGKQEPG N EIL GLK
Sbjct: 133446 ELNALQEELKSLGVIVLGFPCNQFGKQEPGANSEILLGLK 133565



 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +3

Query: 120    KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS 155
              +YVRPG GFVP+FQLFEKGDVNGEKEQKVF+FLK S
Sbjct: 134058 RYVRPGSGFVPNFQLFEKGDVNGEKEQKVFTFLKVS 134165


>gb|JH378152.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00048,
                whole genome shotgun sequence
          Length = 16679805

 Score =  129 bits (325), Expect = 8e-29
 Identities = 73/164 (44%), Positives = 97/164 (59%), Gaps = 4/164 (2%)
 Frame = -3

Query: 40       IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLG 98
                +Y   A+ +   E VS     GK +L  NVA++ G T + Y ++N LQ  L P  LVVLG
Sbjct: 15546394 VYALLALPMAGGEPVSLSSLRGKALLIKNVASF*GTTVRDYTQMNELQRRLGPSDLVVLG 15546215

Query: 99       FPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPH 158
                FPCNQFG QE   N+EIL  LKYV PGGGF  +F LF K +VNG +   +F+FL+  C  
Sbjct: 15546214 FPCNQFGHQENAKNEEILNSLKYV*PGGGFELNFSLFGKREVNGARLHPLFAFLRRPCQR 15546035

Query: 159      PSEILGTFKSISWDPVKV---HDIRWNFEKFLVGPDGIPVMRWS 199
                P+         +W PV +   +++ WN +KFL GP G PV R+S
Sbjct: 15546034 PA-TTPRHS*PTWSPVSLVCHNNVAWNVKKFLDGPTGAPVHRYS 15545906


>gb|JH378190.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00086,
               whole genome shotgun sequence
          Length = 9530769

 Score =  116 bits (290), Expect = 9e-25
 Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 4/114 (3%)
 Frame = +2

Query: 108     EPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE----IL 163
               E   N+EIL  LKYVRPGGGF P+F LFEK +VNG     +F+FL+ + P PS+    ++
Sbjct: 8940206 ENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGSHPLFAFLREALPAPSDDATALM 8940385

Query: 164     GTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 217
                  K I+W PV  +D+ WNFEKFLVGPDG+PV R+S R     ++ DI A L Q
Sbjct: 8940386 TDPKLITWSPVCRNDVAWNFEKFLVGPDGVPVRRYSRRFQTIDIEPDIEALLSQ 8940547


>gb|JH378115.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00011,
                whole genome shotgun sequence
          Length = 43820709

 Score =  106 bits (264), Expect = 9e-22
 Identities = 56/125 (44%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
 Frame = -3

Query: 99       FPCNQ---FGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS 155
                FPC     F   E   N+EIL  LKYVRPGGG+ P+F L +K +VNG+ E  VF++LK  
Sbjct: 22959427 FPCPHSVFFLP*ENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDK 22959248

Query: 156      CPHPSE----ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDI 211
                 P+P +    ++   K I W PV+  D+ WNFEKFL+GP+G P  R+S      S++ DI
Sbjct: 22959247 LPYPYDDPFSLMTDPKFIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTISIEPDI 22959068

Query: 212      LAYLK 216
                   LK
Sbjct: 22959067 KRLLK 22959053



 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -2

Query: 39       TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVL 97
                + YD  AI+L+  E V F  + G+ +L  NVA+  G T + + +LN LQ    P  LVVL
Sbjct: 22963250 SFYDLSAISLD-GEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 22963077

Query: 98       GFPCNQFGKQEPGDNKEILPGLKYV 122
                GFPCNQFG Q  G +     G++ V
Sbjct: 22963076 GFPCNQFGHQVRGPSL*CTKGVESV 22963002


>gb|JH378166.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00062,
               whole genome shotgun sequence
          Length = 14149710

 Score =  104 bits (260), Expect = 3e-21
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +1

Query: 150     SFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKT 209
               S L +SCP  SE++GT   + W+P+KVHDIRWNFEKFLVGPDGIPVMRW HR TVS+VK 
Sbjct: 9818491 SLL*NSCPPTSELVGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPVMRWHHRTTVSNVKM 9818670

Query: 210     DILAYLK 216
               DIL Y++
Sbjct: 9818671 DILLYMR 9818691



 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 38/48 (79%), Positives = 40/48 (83%)
 Frame = +1

Query: 73      CGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 120
               C L    PELNALQEEL P+GLVVLGFPCNQFGKQEPG+N EILP LK
Sbjct: 9817456 CPLFFFGPELNALQEELAPFGLVVLGFPCNQFGKQEPGENSEILPSLK 9817599



 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +1

Query: 29      KMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQY 79
               ++DCH    GTIY+Y A+ +N  EYV FKQ+ GK++LFVNVA+Y GLT QY
Sbjct: 9815905 QVDCHGGMSGTIYEYGALTINGEEYVPFKQFAGKYLLFVNVASY*GLTGQY 9816057



 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 120     KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS 155
               +YVRPGGGFVP+FQLFEKGDVNG+KEQK ++FLK S
Sbjct: 9818010 RYVRPGGGFVPNFQLFEKGDVNGDKEQKFYTFLKVS 9818117


>gb|JH378112.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00008,
               whole genome shotgun sequence
          Length = 45331107

 Score =  101 bits (252), Expect = 2e-20
 Identities = 60/142 (42%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
 Frame = +1

Query: 80      PELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGD 139
               P  N LQ  L P GL VLGF CNQFG  E    +EI   L+YV P  GF  S  L EK +
Sbjct: 8884135 PPGNELQRRLGPRGLAVLGFRCNQFGH*ENARKEEIRNSLQYVPPRAGFESSVMLLEKCE 8884314

Query: 140     VNGEKEQKVFSFLKHSCPHPS----EILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPV 195
               VN    + +F+  + + P PS     ++   + I+  P    D+ WNFEKFLVGPDG+PV
Sbjct: 8884315 VNRAGSRPLFAVPREALPAPSAHATALMTDRELITGTPGGRSDVVWNFEKFLVGPDGVPV 8884494

Query: 196     MRWSHRATVSSVKTDILAYLKQ 217
                R+S R     ++ D  A L Q
Sbjct: 8884495 HRYSCRFQTIDIEPDTEALLSQ 8884560


>gb|JH378108.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00004,
                whole genome shotgun sequence
          Length = 54856640

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -2

Query: 65       LFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVR 123
                L VNVA+ CG T Q Y  L  LQ +L P+   VL FPCNQFG+QEP  NKEI    +   
Sbjct: 32940142 LVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDGNKEIESFARRT- 32939966

Query: 124      PGGGFVPSFQLFEKGDVNGEKEQKVFSFL 152
                    +  SF +F K  V G      F +L
Sbjct: 32939965 ----YSVSFPMFSKIAVTGTGAHPAFKYL 32939891


>gb|JH378213.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00109,
              whole genome shotgun sequence
          Length = 7396992

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = -2

Query: 65     LFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVR 123
              L VNVA+ CG T Q Y  L  LQ +L P+   VL FPCNQFG QEP  NKEI    +   
Sbjct: 165599 LVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGHQEPDGNKEIESFARRT- 165423

Query: 124    PGGGFVPSFQLFEKGDVNGEKEQKVFSFL 152
                  +  SF +F K  V        F +L
Sbjct: 165422 ----YSVSFPMFTKIAVTSTGAYPAFKYL 165348


>gb|JH378120.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00016,
                whole genome shotgun sequence
          Length = 32907957

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -3

Query: 65       LFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVR 123
                L VNVA+ C LT + Y  L  L +E  P    VL FPCNQFG+ EP  +KE+     + R
Sbjct: 17410615 LVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEV---ESFAR 17410445

Query: 124      PGGGFVPSFQLFEKGDVNGEKEQKVFSFL 152
                   G   +F +F K  + G + +  F FL
Sbjct: 17410444 KNYGV--TFPIFHKIKILGSEGEPAFRFL 17410364


  Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome
  .fa
    Posted date:  Oct 24, 2012  8:25 PM
  Number of letters in database: 2,608,572,064
  Number of sequences in database:  2685
  
Lambda     K      H
   0.320    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 734,925,490
Number of Sequences: 2685
Number of extensions: 12054678
Number of successful extensions: 42995
Number of sequences better than 1.0e-03: 10
Number of HSP's better than  0.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 39228
Number of HSP's gapped (non-prelim): 15376
length of query: 221
length of database: 869,524,021
effective HSP length: 126
effective length of query: 95
effective length of database: 869,185,711
effective search space: 82572642545
effective search space used: 82572642545
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)