genewise output Score 1323.20 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000038_1.0 1 MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITL MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITL MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITL GL397475.1:subs49964 aggccgagagggcgcagagaagcgcgcaaagtaggtgacccacgcgaac tcgggtatatgttgataggacctcgctgccccccctaaacaggaggtct gaggggcgcgcggccccccgggggggaccaccccctcggggccgcccgc SPP00000038_1.0 50 DLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHAS DLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHAS DLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHAS GL397475.1:subs50111 gcgtttttgcccgccctttcgtcggcgggcgcggccccgacggtcgcgt atgtcgtctctccgtgcctcatacccacacacgacttatcttagcgacc tgccgccggggcgcgggtgcgcgagcgcgcgccgagtgtggccccgccc SPP00000038_1.0 99 LIRTIIG AQIIDLMMLVIDVTKG LIRTIIG AQIIDLMMLVIDVTKG LIRTIIG G:G[ggg] AQIIDLMMLVIDVTKG GL397475.1:subs50258 cacaaagGGTGAGCG Intron 1 CAGGGgcaagcaacgaggaag ttgcttg <1-----[50280:160241-1> cattattttttatcag ccgcccc cgcttggggcctgcgg SPP00000038_1.0 123 MQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTL MQTQSAECLVIGQIACQKLVVVLNKIDLL EGKRQAAIDKMTKKMQKTL MQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTL GL397475.1:sub160292 acactggtcgagcagtcacgggcaaagctgggaacggagaaaaaacaac tacaccagtttgatcgaatttttaatattcagagacctaatcaataact ggcgagactgccgtccgggcgggcaaccataagagaattagcgagggca SPP00000038_1.0 172 ENT FRGAPIIPVAAKPGGPEAPE ENT FRGAPI+PVAAKPGGPEAPE ENT K:K[aag] FRGAPIMPVAAKPGGPEAPE GL397475.1:sub160439 gaaAAGTAGGTC Intron 2 CAGGtcggcaacgggacggcggcg aac <2-----[160450:17548-2> tggccttctccacggcacca gcc catagtgcggcgggaagcta SPP00000038_1.0 196 TEAPQGIPELIE LLTSQISIPTRDPS TEAPQGIPELIE LLTSQISIP RDPS TEAPQGIPELIE LLTSQISIPARDPS GL397475.1:sub175544 aggccgacgcagGTACTGT Intron 3 TAGccatcatacgagct caccagtcatta<0-----[175580:17796-0>ttccatctccgacc tatagctagctg cggcgtccagaccg SPP00000038_1.0 222 GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK GL397475.1:sub178011 gctcatggctttaagcgagaagaactgtaacggaggacgca gctttctaagtctagagcttcgcttcgctgtgagtatccta agccgtgcctcccacactggagcctaccccctctggctccg SPP00000038_1.0 263 VVKKVKSMQMFHMPITSAMQGDRLGI VVKKVKSMQMFHMPITSAMQGDRLGI VVKKVKSMQMFHMPITSAMQGDRLGI GL397475.1:sub178134 GTCAGTC Intron 4 CAGggaagatacatcacaatgacggccga <0-----[178134:25559-0>ttaatactattatctccctagagtgt ggggggcgggccgcctacgaacggcc SPP00000038_1.0 289 CVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHI CVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHI CVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHI GL397475.1:sub255673 tgactgcaccgcgtgtgcgtccagcggcatggaacttcgctcaagatca gtcatacattaggttgccactactaccttctaatcatggctacacatat cccgtccggggcgggtccgcgctctaccctgagaatcggcgacgcgcct SPP00000038_1.0 338 TVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTP TVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTP TVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTP GL397475.1:sub255820 aggcgagagctattacgcgatgcgcacgttattcgtctcgctctagtac ctgaacttggttttgcccaataaacttactatcaaattaaaatcaatcc agctaccgcgggcccttatctcggtagctccctaacccgggcgcgtgaa SPP00000038_1.0 387 AVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDA AVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDA AVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDA GL397475.1:sub255967 ggagaggggaaggcgaggctcccctgcggtgacgatccctcgagtacgg ctcaaaacaaacgaccagagcgaagcttataactcgcgtgtttgcgtac agacttgccggtcgcagctttggggcgggtggcccctggcggtccgatg SPP00000038_1.0 436 DIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER DIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER DIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER GL397475.1:sub256114 gacaaatccgtcgacccgcggaatggatccacagtacacacgcggc atacacggtctagtttagtaagaacagttcgtataataaaagttag ctcccgcgacctccgccgagcgccccctgcggggcgggcgtccggg SPP00000038_1.0 482 AMDDYSVIGRSLFKKETNIQLFVGLK AMD+YSVIGRSLFKKETNIQLFVGLK AMDEYSVIGRSLFKKETNIQLFVGLK GL397475.1:sub256252 GTGAGCA Intron 5 CAGgaggtagagctctaagaaacctggca <0-----[256252:27257-0>ctaaagttggcttaaacatatttgta ggtactgccccgcaggcccgccggcg SPP00000038_1.0 508 VHLSTGELGIIDSAFGQSGKFKIHIP VHLSTGELGIIDSAFGQSGKFKIHIP VHLSTGELGIIDSAFGQSGKFKIHIP G:G[ggt] GL397475.1:sub272654 gcctaggcgaagagtgcagataacacGGTAAGTG Intron 6 tatccgatgttagctgaggatatatc <1-----[272733:322109 gcgctgagcccctctcgtcgcgccca SPP00000038_1.0 534 GLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLS GLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHV LS GLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVALS GL397475.1:sub322107 CAGGTgcacgtaaacacgcaacgcggcgggaacggaggcagctccggca -1> gtgcacaattccctaagcgcgggaccgaaagcaggaccaatctg ccccgcggcgatccgggcgtctggccggggccggcgcagcggcc SPP00000038_1.0 579 LTFKRYVFDTHKRMVQSP LTFKRYVFDTHKRMVQSP LTFKRYVFDTHKRMVQSP GL397475.1:sub322244 catactgtgacacagctc tctagattacaagttacc gtcgtccccccgcgtgtc // Making a G in phase 1 intron Making a K in phase 2 intron Making a G in phase 1 intron >GL397475.1:subseq(537966,372297).pep MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPL PARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVT KGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAP IMPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPARDPSGPFLMSVDHCFSIKGQGTV MTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLER GLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQ EPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPV TCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVE RAMDEYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPES KKILTPALKKRARAGRGEATRQEESAERSEPSQHVALSLTFKRYVFDTHKRMVQSP // >GL397475.1:subseq(537966,372297).[49964:322297].sp ATGGCAGGGCGGCGGGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAG ACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCG CAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTG CCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAG CCCGGCGAGCCACTGCTTCAGGTTACGCTGGTCGACTGCCCCGGGCACGCCTCCCTCATC CGGACCATCATCGGCGGGGCCCAGATCATTGATCTGATGATGCTGGTCATCGATGTGACC AAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAG CTGGTCGTGGTGCTGAACAAAATAGACCTCTTAGCTGAAGGAAAGAGACAGGCAGCAATT GATAAAATGACCAAGAAAATGCAGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACCG ATTATGCCCGTGGCGGCCAAGCCGGGGGGACCAGAGGCCCCTGAAACTGAAGCTCCACAG GGCATTCCAGAGCTCATTGAGCTCCTGACGTCCCAGATTTCCATCCCAGCGAGAGACCCC TCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTG ATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTGTGGAGATCCCTGCC CTCAAGGTGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACATGCCCATCACTTCAGCC ATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGACCCCAAGCTGCTGGAGCGC GGGTTGGTGTGTGCCCCCGAGTCCCTGCACACTGTCCATGCAGCCCTCATCTCTGTGGAA AAGATACCATATTTCCGGGGGCCCTTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGC CATGAAACCGTCATGGGCCGGTTGATGTTCTTCAGCCCTGCTCCAGATAACTTTGACCAG GAGCCTATACTGGACTCTTTCAACTTCTCTCAAGAATACCTCTTCCAGGAGCAGTACCTG TCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCTGGCCAG GCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTGAGAAGCCCGTC ACCTGCCCTCGGCTGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCACACCAAC ACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAGGAACTACGCC GACAGCTTTCTGCCCAGGCTGAAGGTGTACAAGCTGAAGCACAAGCATGGCCTCGTGGAG CGGGCGATGGATGAATACAGTGTGATCGGCCGCTCCCTGTTCAAAAAGGAGACCAACATC CAGCTCTTCGTGGGGCTCAAGGTGCACCTGTCCACTGGGGAACTGGGCATCATCGACAGT GCCTTTGGCCAGAGTGGCAAGTTCAAGATCCACATCCCAGGTGGCCTCAGCCCCGAGTCC AAGAAGATCCTGACACCTGCCCTCAAGAAGCGGGCCCGGGCTGGCCGTGGGGAGGCCACC AGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCACGTGGCGCTCAGCCTGACT TTCAAGCGTTACGTCTTCGACACCCACAAGCGCATGGTTCAGTCTCCC // GL397475.1:subseq(537966,372297) GeneWise match 49964 322297 1323.20 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 49964 50279 0.00 + 0 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 50280 160241 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 160242 160449 0.00 + 2 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 160450 175482 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 175483 175579 0.00 + 1 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 175580 177968 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 177969 178133 0.00 + 0 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 178134 255594 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 255595 256251 0.00 + 0 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 256252 272575 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 272576 272732 0.00 + 0 GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise intron 272733 322109 0.00 + . GL397475.1:subseq(537966,372297)-genewise-prediction-1 GL397475.1:subseq(537966,372297) GeneWise cds 322110 322297 0.00 + 2 GL397475.1:subseq(537966,372297)-genewise-prediction-1 //