genewise output Score 724.76 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000036_1.0 205 NVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQ + L L +DG ++ LSE+ + +P +FV + +GG T++ SALLLCHTEDGRALEGTLSELATETDLPVVFVKQRKIGGHGPTLK GL397326.1:subs21845 tgccttcagggcgcggactgtgagagccggtgacaaaggcgcata cctttgacaaggctagctcatccacatcttttaagatggagccta ctgtgccagctgtgaagcgagcgactgctgtgagagaccttacgg SPP00000036_1.0 250 AYQSGLLQKLLQ----EDL--AYDYD AYQ G LQKLL+ EDL YDYD AYQEGRLQKLLKMDGPEDLPESYDYD GL397326.1:subs21980 GTAGGAG Intron 1 TAGgtcggaccaccaaggcggccgttgtg <0-----[21980:45493]-0>caaaggtaattatagcaatcacaaaa ttggcatagaaagcctattcgctctc SPP00000036_1.0 270 LIIIGGGSGGLSCAK-EAAIL -- LIIIGGGSGGL+ AK +L LIIIGGGSGGLAAAKARLLVL -:S[tcc] RY GL397326.1:subs45572 caaagggtggcgggagaccgtTGTGTTGT Intron 2 CAGCCct ttttgggcggtcccacgtttt <1-----[45636:47462]-1> ga tcctatcaacgattgagctgg at SPP00000036_1.0 290 GKKVMVLDFVVPSPQGTSW LGGT GKKVMVLDFV P+P GT W LGGT GKKVMVLDFVTPTPLGTRW G:G[ggt] LGGT GL397326.1:subs47471 gaagagcgtgacaccgaatGGTAAGCT Intron 3 TAGGTcgga gaattttattcccctgcgg <1-----[47529:50000]-1> tggc cggggcgctctcgttatag taaa SPP00000036_1.0 314 CVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQ CVNVGCIPKKLMHQAALLGQAL DSR +GW+ + CVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEET GL397326.1:subs50015 tgaggtacaacaccggttgcgccgtcatgtaggga gtatggtcaattaaccttgactaacgaaggataac tgtgtcataaggtaatgaaacgactactagacgga SPP00000036_1.0 349 RHNWETMTKAIQNHISSLNWGYR +H+W+ M +A+QNHI SLNWGYR V:V[gtt] KHDWDRMIEAVQNHIGSLNWGYR GL397326.1:subs50120 GGTATGAC Intron 4 CAGTTacgtgaaagggcacagttatgtc <1-----[50121:53119]-1> aaagagttactaaatgctaggag gttgcagaatagtctctgtgcca SPP00000036_1.0 373 LSLREKAVAYVNSYGEFVEHHKIK AT ++LREK V Y N+YG+F+ H+IK AT VALREKKVVYENAYGQFIGPHRIK AT GL397326.1:subs53191 ggccgaaggtgagtgctagccaaaGTAATTG Intron 5 TAGga tctgaaattaaacagattgcagta<0-----[53263:53544]-0>cc atgggaacctgttcgatttttgtg at SPP00000036_1.0 399 NKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT N KG+E Y+A +F+IATGERPRYLGI GDKEYCI+ NNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS GL397326.1:subs53551 aaagagaattggatcagaggaccttgacggagttaa aaagaaataccagtttccgagcgatgtcgaaaagtg ttacaaattaagatctcttaaatcgccttcaacccc SPP00000036_1.0 435 DDLFSLPYCPGKTLVVGASYVAL DDLFSLPYCPGKTLVVGASYVAL S:S[agt] DDLFSLPYCPGKTLVVGASYVAL GL397326.1:subs53659 AGGTAAAGA Intron 6 CAGTggctttcttcgaacggggttggt <2-----[53661:54990]-2> aattctcagcgactttgccatct tttccgtccgtgtgttaactccg SPP00000036_1.0 459 ECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKFI ECAGFLAG+GLDVTVMVRSILLRGFDQ+MA K+G +ME+HG+KF+R+F+ ECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFV GL397326.1:subs55061 gtggtcggagtggagagataccagtgcgagaaaggcaggcgaataactg agcgttcgtgtatctttgctttggtaaatcaatgaataaagtattgatt gttattttttaccttgtgctttaatcgcgccattacgaatccgtaagta SPP00000036_1.0 508 PVM VQQLEKGSPGKLKVLAKSTEGTE P+ V+Q+E G+PG+L+V+A+ST E PIK VEQIEAGTPGRLRVVAQSTNSEE GL397326.1:subs55208 caaGTAAGTG Intron 7 CAGggcagggacgccagggctaaagg cta<0-----[55217:58151]-0>taatacgccggtgttcaccagaa ata taataggaacacaaatgccttga SPP00000036_1.0 534 TIEGVYNT VLLAIGRDSCTRKIGLEK IEG YNT VLLAIGRD+CTRKIGLE IIEGEYNT VLLAIGRDACTRKIGLET GL397326.1:subs58221 aagggtaaGTAAGGA Intron 8 CAGgtcgagaggtaaaagtga ttagaaac<0-----[58245:59152]-0>tttctggacgcgatgtac ctaaattg gggaaaattcaaatcaac SPP00000036_1.0 560 IGVKINE SGKIPVNDVEQTNVPY +GVK+NE +GKIPV D EQTNVPY VGVKLNE K:K[aag] TGKIPVTDEEQTNVPY GL397326.1:subs59207 gggacagAAGTAAGAA Intron 9 CAGGagaacgagggcaagct tgtataa <2-----[59230:60302]-2> cgatctcaaaacatca agggata taaatcataagctgtc SPP00000036_1.0 584 VYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEK +YA+GDILEDK ELTPVAIQ+G+LLAQRL+ S K IYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK GL397326.1:subs60352 atgaggacggaggcacggacggatcgcactggtaga tactgattaaatatcctctacggttcagtacgccta ttctctaggtgggccatacgaaaggtggctatctcg SPP00000036_1.0 620 CDYINVPTTVFTPLEYGCCGLSEEKA CDY NVPTTVFTPLEYG CGLSEEKA CDYENVPTTVFTPLEYGACGLSEEKA GL397326.1:subs60460 GTGAGTG Intron 10 CAGtgtgagcaagtactgtggtgctggag <0-----[60460:63803]-0>gaaaatcccttcctaagcggtcaaac tctattactatttgattttcttggat SPP00000036_1.0 646 IEVYKKENLE IYHTLFWPLEWTVAGR +E + +EN+E +YH+ FWPLEWT+ R VEKFGEENIE VYHSYFWPLEWTIPSR GL397326.1:subs63882 ggatgggaagGTAAGTT Intron 11 TAGgtcatttctgtaacta taatgaaata<0-----[63912:66488]-0>taagatgctagctccg gggtgaattg tcttctgagagattaa SPP00000036_1.0 672 ENNTCYAKIICNKFDH DRVIGFHILG +NN CYAKIICN D+ +RV+GFH+LG DNNKCYAKIICNTKDN ERVVGFHVLG GL397326.1:subs66537 gaaattgaaataaagaGTAAGTG Intron 12 TAGgcgggtcgcg aaaagacattgacaaa<0-----[66585:74517]-0>agttgtattg tccatcaaactttact attgctcagt SPP00000036_1.0 698 PNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGE PNAGEVTQGFAAA+KCGLTK LD TIGIHP C E PNAGEVTQGFAAALKCGLTKNQLDSTIGIHPVCAE GL397326.1:subs74548 caggggacgtgggcatgcaaaccgaaagaccgtgg cacgatcagtccctaggtcaaatagctgtactgca attaataaccatgcatagcacggccatacctctag SPP00000036_1.0 733 VFTTLEITKSSGLDITQKGC VFTTL +TK SG I Q GC VFTTLSVTKRSGASILQAGC GL397326.1:subs74653 GTGGGTC Intron 13 CAGgtaattgaactggaaccggt <0-----[74653:83712]-0>ttcctctcagcgcgttacgg acaagtgcgctgacctgtcc // Making a S in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >GL397326.1:subseq(9230278,124655).pep SALLLCHTEDGRALEGTLSELATETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLLKMDG PEDLPESYDYDLIIIGGGSGGLAAAKARLLVLSRYGKKVMVLDFVTPTPLGTRWGLGGTC VNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVA LREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVLLAIGRDACTRK IGLETVGVKLNEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNN KCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKNQLDSTIGIHPVCAEVF TTLSVTKRSGASILQAGC // >GL397326.1:subseq(9230278,124655).[21845:83772].sp TCCGCTCTGCTTTTGTGCCACACAGAGGACGGTCGGGCTCTGGAAGGAACGCTCTCGGAA TTGGCCACGGAAACCGATCTGCCCGTTGTGTTTGTGAAACAGAGAAAGATAGGCGGCCAT GGTCCAACCTTGAAGGCTTATCAGGAGGGCAGACTTCAAAAGCTACTAAAAATGGACGGC CCTGAAGATCTTCCCGAGTCCTATGACTATGACCTTATCATCATTGGAGGTGGCTCAGGA GGCCTGGCAGCTGCTAAGGCAAGGCTCCTTGTGTTGTCCCGATATGGCAAGAAGGTGATG GTCCTGGACTTTGTCACTCCCACGCCTCTTGGAACTAGATGGGGTCTTGGAGGAACATGT GTGAATGTGGGTTGCATACCTAAAAAACTGATGCATCAAGCAGCTTTGTTAGGACAAGCC CTGCAAGACTCTCGAAACTATGGATGGAAAGTCGAGGAGACAGTTAAGCATGATTGGGAC AGAATGATAGAAGCTGTACAGAATCACATTGGCTCTTTGAATTGGGGCTACCGAGTAGCT CTGCGGGAGAAAAAAGTCGTCTATGAGAATGCTTACGGGCAATTTATTGGTCCTCATAGG ATTAAGGCAACTAATAATAAAGGCAAAGAAAAAATTTATTCAGCAGAGAGATTTCTCATT GCCACTGGTGAAAGACCACGTTACTTGGGCATCCCTGGTGACAAAGAATACTGCATCAGC AGTGATGATCTTTTCTCCTTGCCTTACTGCCCGGGTAAGACTCTGGTTGTTGGAGCATCC TATGTCGCCTTGGAGTGTGCTGGATTTCTTGCTGGTATTGGTTTAGACGTCACTGTTATG GTTAGGTCCATTCTTCTTAGAGGATTTGACCAGGACATGGCCAACAAAATTGGTGAACAC ATGGAAGAACATGGCATCAAGTTTATAAGACAGTTTGTACCAATTAAAGTTGAACAAATT GAAGCGGGGACACCAGGCCGACTCAGAGTAGTAGCTCAGTCCACCAATAGTGAGGAAATC ATTGAAGGAGAATATAATACGGTGTTGCTGGCAATAGGAAGAGATGCTTGCACAAGAAAA ATTGGCTTAGAAACCGTAGGGGTGAAGCTAAATGAAAAGACTGGAAAAATACCTGTCACA GATGAAGAACAGACCAATGTGCCTTACATTTATGCCATTGGCGATATACTGGAGGATAAG GTGGAGCTCACCCCAGTTGCAATCCAGGCAGGAAGATTGCTGGCTCAGAGGCTCTATGCA GGTTCCACTGTCAAGTGTGACTATGAAAATGTTCCAACCACTGTATTTACTCCTTTGGAA TATGGTGCTTGTGGCCTTTCTGAGGAGAAAGCTGTGGAGAAGTTTGGGGAAGAAAATATT GAGGTTTACCATAGTTACTTTTGGCCATTGGAATGGACAATTCCTTCAAGAGATAACAAC AAATGTTACGCAAAAATAATCTGTAATACTAAAGACAATGAACGTGTTGTGGGCTTTCAC GTACTGGGTCCAAATGCTGGAGAAGTTACACAAGGCTTCGCAGCTGCGCTCAAATGTGGA CTGACCAAAAACCAGCTGGACAGCACAATTGGAATCCACCCTGTCTGTGCAGAGGTATTC ACAACATTGTCTGTGACCAAGCGCTCTGGGGCAAGCATCCTTCAGGCTGGCTGC // GL397326.1:subseq(9230278,124655) GeneWise match 21845 83772 729.75 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 21845 21979 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 21980 45493 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 45494 45635 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 45636 47462 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 47463 47528 0.00 + 2 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 47529 50000 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 50001 50120 0.00 + 2 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 50121 53119 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 53120 53262 0.00 + 2 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 53263 53544 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 53545 53660 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 53661 54990 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 54991 55216 0.00 + 1 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 55217 58151 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 58152 58244 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 58245 59152 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 59153 59229 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 59230 60302 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 60303 60459 0.00 + 1 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 60460 63803 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 63804 63911 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 63912 66488 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 66489 66584 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 66585 74517 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 74518 74652 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise intron 74653 83712 0.00 + . GL397326.1:subseq(9230278,124655)-genewise-prediction-1 GL397326.1:subseq(9230278,124655) GeneWise cds 83713 83772 0.00 + 0 GL397326.1:subseq(9230278,124655)-genewise-prediction-1 //