genewise output
Score 21.60 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000035_1.0  111 PNYGWEVA                          PVPHDW          
                     P +GWE                            PVPH W          
                     PGWGWEQP          Q:A[gcc]        PVPHSW          
GL397492.1:subs15738 cgtgtgccGGTGAGTG  Intron 1   CAGCCcgccat          
                     cggggaac <1-----[15763:110602-1>  ctcagg          
                     aagggggt                          tcttcg          


//
Making a A in phase 1 intron
>GL397492.1:subseq(786524,141206).pep
PGWGWEQPAPVPHSW
//
>GL397492.1:subseq(786524,141206).[15738:110622].sp
CCAGGATGGGGGTGGGAGCAGCCTGCCCCTGTCCCTCATAGCTGG
//
GL397492.1:subseq(786524,141206)	GeneWise	match	15738	110622	21.60	+	.	GL397492.1:subseq(786524,141206)-genewise-prediction-1
GL397492.1:subseq(786524,141206)	GeneWise	cds	15738	15762	0.00	+	0	GL397492.1:subseq(786524,141206)-genewise-prediction-1
GL397492.1:subseq(786524,141206)	GeneWise	intron	15763	110602	0.00	+	.	GL397492.1:subseq(786524,141206)-genewise-prediction-1
GL397492.1:subseq(786524,141206)	GeneWise	cds	110603	110622	0.00	+	2	GL397492.1:subseq(786524,141206)-genewise-prediction-1
//