genewise output Score 419.05 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000035_1.0 39 DYDLLVVGGGSGGLACAKEA---- DYDL+++GGGSGGLA AK DYDLIIIGGGSGGLAAAKARLLVL A:S[tcc] GL397326.1:subs45563 gtgcaaagggtggcgggagaccgtTGTGTTGT Intron 1 aaattttgggcggtcccacgtttt <1-----[45636:47462] ctctcctatcaacgattgagctgg SPP00000035_1.0 59 QLGRKVAVVDYVEPSPQGTRW + G+KV V+D+V P+P GTRW RYGKKVMVLDFVTPTPLGTRW G:G[ggt] GL397326.1:subs47460 CAGCCctgaagagcgtgacaccgaatGGTAAGCT Intron 2 -1> gagaattttattcccctgcgg <1-----[47529:50000] atcggggcgctctcgttatag SPP00000035_1.0 81 LGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP LGGTCVNVGCIPKKLMHQAALLG +QD+ NYGW+V + LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEET GL397326.1:subs49998 TAGGTcggatgaggtacaacaccggttgcgccgtcatgtaggga -1> tggcgtatggtcaattaaccttgactaacgaaggataac taaatgtgtcataaggtaatgaaacgactactagacgga SPP00000035_1.0 121 PHDWRKMAEAVQNHVKSLNWGHR HDW +M EAVQNH+ SLNWG+R V:V[gtt] KHDWDRMIEAVQNHIGSLNWGYR GL397326.1:subs50120 GGTATGAC Intron 3 CAGTTacgtgaaagggcacagttatgtc <1-----[50121:53119]-1> aaagagttactaaatgctaggag gttgcagaatagtctctgtgcca SPP00000035_1.0 145 VQLQDRKVKYFNIKASFVDEHTVC GV V L+++KV Y N F+ H + VALREKKVVYENAYGQFIGPHRIK AT GL397326.1:subs53191 ggccgaaggtgagtgctagccaaaGTAATTG Intron 4 TAGga tctgaaattaaacagattgcagta<0-----[53263:53544]-0>cc atgggaacctgttcgatttttgtg at SPP00000035_1.0 171 AKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGIT GKE + SA+ ++IATG RPRY I G EY I+ NNKGKEKIYSAERFLIATGERPRY-LGIPGDKEYCIS GL397326.1:subs53551 aaagagaattggatcagaggacct tgacggagttaa aaagaaataccagtttccgagcga tgtcgaaaagtg ttacaaattaagatctcttaaatc gccttcaacccc SPP00000035_1.0 208 DDIFWLKESPGKTLVVGASYVAL DD+F L PGKTLVVGASYVAL S:S[agt] DDLFSLPYCPGKTLVVGASYVAL GL397326.1:subs53659 AGGTAAAGA Intron 5 CAGTggctttcttcgaacggggttggt <2-----[53661:54990]-2> aattctcagcgactttgccatct tttccgtccgtgtgttaactccg SPP00000035_1.0 232 ECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCA ECAGFL GIGLD T+M+RSI LRGFDQ M++ + EHM HG +F+R ECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFV GL397326.1:subs55061 gtggtcggagtggagagataccagtgcgagaaaggcaggcgaataactg agcgttcgtgtatctttgctttggtaaatcaatgaataaagtattgatt gttattttttaccttgtgctttaatcgcgccattacgaatccgtaagta SPP00000035_1.0 281 PSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTV P +V + DST + + V PIKV-----SGYACRFVDSTFTVKGKKRVELV GL397326.1:subs55208 caag agtgtatggtatagagaaaggtg ctat ggacggttacctctagaagtatt ataa tgtctgttttacgaacagatggg SPP00000035_1.0 313 -LWAIGRVPDTRSLNLEKAGVDTSP L AIGR TR + LE GV + VLLAIGRDACTRKIGLETVGVKLNE GL397326.1:subs55289 GTAGAAG Intron 6 CAGgtcgagaggtaaaagtgagggacag <0-----[55289:59152]-0>tttctggacgcgatgtactgtataa gggaaaattcaaatcaacagggata SPP00000035_1.0 337 TQKILVDSREATSVPHIYAIGDV T KI V E T+VP+IYAIGD+ D:K[aag] TGKIPVTDEEQTNVPYIYAIGDI GL397326.1:subs59228 AAGTAAGAA Intron 7 CAGGagaacgagggcaagctatgagga <2-----[59230:60302]-2> cgatctcaaaacatcatactgat taaatcataagctgtcttctcta SPP00000035_1.0 361 VEGRPELTPIAIMAGRLLVQRLFGGSSDL +E + ELTP+AI+AGRLL QRL+ GS+ LEDKVELTPVAIQAGRLLAQRLYAGSTVK GL397326.1:subs60373 cggaggcacggacggatcgcactggtagaGTGAGTG Intron 8 taaatatcctctacggttcagtacgccta<0-----[60460:63803] ggtgggccatacgaaaggtggctatctcg SPP00000035_1.0 390 MDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVE DY+NVPTTVFTPLEYG GLSEE+AV + G+E++E CDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIE GL397326.1:subs63801 CAGtgtgagcaagtactgtggtgctggagggatgggaag -0>gaaaatcccttcctaagcggtcaaactaatgaaata tctattactatttgattttcttggatgggtgaattg SPP00000035_1.0 426 VYHAHYKPLEFTVAGRDASQCYVKMV VYH+++ PLE+T+ RD ++CY K++ VYHSYFWPLEWTIPSRDNNKCYAKII GL397326.1:subs63912 GTAAGTT Intron 9 TAGgtcatttctgtaactagaaattgaaa <0-----[63912:66488]-0>taagatgctagctccgaaaagacatt tcttctgagagattaatccatcaaac SPP00000035_1.0 452 CLREPP QLVLGLHFLGPNAGEVTQGF C + + V+G H LGPNAGEVTQGF CNTKDN ERVVGFHVLGPNAGEVTQGF GL397326.1:subs66567 taaagaGTAAGTG Intron 10 TAGgcgggtcgcgcaggggacgt gacaaa<0-----[66585:74517]-0>agttgtattgcacgatcagt tttact attgctcagtattaataacc SPP00000035_1.0 478 ALGIKCGASYAQVMRTVGIHPTCSE A +KCG + Q+ T+GIHP C+E AAALKCGLTKNQLDSTIGIHPVCAE GL397326.1:subs74578 gggcatgcaaaccgaaagaccgtgg ccctaggtcaaatagctgtactgca atgcatagcacggccatacctctag // Making a S in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >GL397326.1:subseq(9230278,124652).pep DYDLIIIGGGSGGLAAAKARLLVLSRYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPK KLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVY ENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLP YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKF IRQFVPIKVSGYACRFVDSTFTVKGKKRVELVVLLAIGRDACTRKIGLETVGVKLNEKTG KIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTV FTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNER VVGFHVLGPNAGEVTQGFAAALKCGLTKNQLDSTIGIHPVCAE // >GL397326.1:subseq(9230278,124652).[45563:74652].sp GACTATGACCTTATCATCATTGGAGGTGGCTCAGGAGGCCTGGCAGCTGCTAAGGCAAGG CTCCTTGTGTTGTCCCGATATGGCAAGAAGGTGATGGTCCTGGACTTTGTCACTCCCACG CCTCTTGGAACTAGATGGGGTCTTGGAGGAACATGTGTGAATGTGGGTTGCATACCTAAA AAACTGATGCATCAAGCAGCTTTGTTAGGACAAGCCCTGCAAGACTCTCGAAACTATGGA TGGAAAGTCGAGGAGACAGTTAAGCATGATTGGGACAGAATGATAGAAGCTGTACAGAAT CACATTGGCTCTTTGAATTGGGGCTACCGAGTAGCTCTGCGGGAGAAAAAAGTCGTCTAT GAGAATGCTTACGGGCAATTTATTGGTCCTCATAGGATTAAGGCAACTAATAATAAAGGC AAAGAAAAAATTTATTCAGCAGAGAGATTTCTCATTGCCACTGGTGAAAGACCACGTTAC TTGGGCATCCCTGGTGACAAAGAATACTGCATCAGCAGTGATGATCTTTTCTCCTTGCCT TACTGCCCGGGTAAGACTCTGGTTGTTGGAGCATCCTATGTCGCCTTGGAGTGTGCTGGA TTTCTTGCTGGTATTGGTTTAGACGTCACTGTTATGGTTAGGTCCATTCTTCTTAGAGGA TTTGACCAGGACATGGCCAACAAAATTGGTGAACACATGGAAGAACATGGCATCAAGTTT ATAAGACAGTTTGTACCAATTAAAGTAAGTGGGTATGCCTGTAGGTTTGTTGATTCTACA TTCACGGTAAAAGGCAAAAAGAGAGTTGAGTTGGTGGTGTTGCTGGCAATAGGAAGAGAT GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAAGCTAAATGAAAAGACTGGA AAAATACCTGTCACAGATGAAGAACAGACCAATGTGCCTTACATTTATGCCATTGGCGAT ATACTGGAGGATAAGGTGGAGCTCACCCCAGTTGCAATCCAGGCAGGAAGATTGCTGGCT CAGAGGCTCTATGCAGGTTCCACTGTCAAGTGTGACTATGAAAATGTTCCAACCACTGTA TTTACTCCTTTGGAATATGGTGCTTGTGGCCTTTCTGAGGAGAAAGCTGTGGAGAAGTTT GGGGAAGAAAATATTGAGGTTTACCATAGTTACTTTTGGCCATTGGAATGGACAATTCCT TCAAGAGATAACAACAAATGTTACGCAAAAATAATCTGTAATACTAAAGACAATGAACGT GTTGTGGGCTTTCACGTACTGGGTCCAAATGCTGGAGAAGTTACACAAGGCTTCGCAGCT GCGCTCAAATGTGGACTGACCAAAAACCAGCTGGACAGCACAATTGGAATCCACCCTGTC TGTGCAGAG // GL397326.1:subseq(9230278,124652) GeneWise match 45563 74652 426.03 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 45563 45635 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 45636 47462 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 47463 47528 0.00 + 2 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 47529 50000 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 50001 50120 0.00 + 2 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 50121 53119 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 53120 53262 0.00 + 2 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 53263 53544 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 53545 53660 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 53661 54990 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 54991 55288 0.00 + 1 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 55289 59152 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 59153 59229 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 59230 60302 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 60303 60459 0.00 + 1 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 60460 63803 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 63804 63911 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 63912 66488 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 66489 66584 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise intron 66585 74517 0.00 + . GL397326.1:subseq(9230278,124652)-genewise-prediction-1 GL397326.1:subseq(9230278,124652) GeneWise cds 74518 74652 0.00 + 0 GL397326.1:subseq(9230278,124652)-genewise-prediction-1 //