Command line: [exonerate -m p2g --showtargetgff -q SPP00000021_1.0.fa -t SPP00000021_1.0.GL397330.1/GL397330.1.subseq]
Hostname: [upf-OptiPlex-755]

C4 Alignment:
------------
         Query: SPP00000021_1.0 # Protein # Methionine-R-sufoxide reductase 1 (SelR1) # Homo sapiens # Complete
        Target: GL397330.1:subseq(2333905,100351) dna:supercontig supercontig:Nleu1.0:GL397330.1:1:12634774:1 REF
         Model: protein2genome:local
     Raw score: 471
   Query range: 0 -> 116
  Target range: 49999 -> 50351

     1 : MetSerPheCysSerPhePheGlyGlyGluValPheGlnAsnHisPheGluProGlyVal :    20
         ||||||||||||||||||||||||||||||||||||!!.|||||||||||||||||||||
         MetSerPheCysSerPhePheGlyGlyGluValPheHisAsnHisPheGluProGlyVal
 50000 : ATGTCGTTCTGCAGCTTCTTCGGGGGCGAGGTTTTCCACAATCACTTTGAGCCAGGTGTC : 50057

    21 : TyrValCysAlaLysCysGlyTyrGluLeuPheSerSerArgSerLysTyrAlaHisSer :    40
         |||:!!||||||||||||||||||||||||||| !! !!||||||||||||.!!:!!|||
         TyrMetCysAlaLysCysGlyTyrGluLeuPheProArgArgSerLysTyrThrTyrSer
 50058 : TATATGTGTGCCAAGTGTGGCTATGAGCTGTTCCCCCGTCGCTCAAAGTACACATACTCA : 50117

    41 : SerProTrpProAlaPheThrGluThrIleHisAlaAspSerValAlaLysArgProGlu :    60
         ! !||||||! !|||||||||:!!||||||!.!:!!||||||||||||||| !!||||||
         PheProTrpLeuAlaPheThrLysThrIleArgSerAspSerValAlaLysCysProGlu
 50118 : TTCCCCTGGCTGGCGTTCACCAAGACCATCCGCTCTGACAGCGTGGCCAAGTGCCCAGAG : 50177

    61 : HisAsnArgSerGluAlaLeuLysValSerCysGlyLysCysGlyAsnGlyLeuGlyHis :    80
         ||||||!.! !!|||!.!||||||||||||||||||||||||||||||  !|||.!!|||
         HisAsnHisProGluValLeuLysValSerCysGlyLysCysGlyAsnThrLeuSerHis
 50178 : CACAATCATCCTGAAGTCTTGAAGGTGTCCTGTGGCAAGTGTGGCAACACGTTGAGCCAC : 50237

    81 : GluPheLeuAsnAspGlyProLysProGlyGlnSerArgPheUnk----IlePheSerSe :    99
         :!!|||||||||||||||||||||! ! !!|||||| !!|||   ####|||||||||||
         GlnPheLeuAsnAspGlyProLysLeuArgGlnSer***PheCys####IlePheSerSe
 50238 : CAGTTCCTGAACGATGGCCCCAAGCTGCGGCAGTCCTGATTCTGCATGAATATTCAGCAG : 50298

   100 : rSerLeuLysPheValProLysGlyLysGluThrSerAlaSerGlnGlyHis :   116
         ||||||||||||||||||||||||||||||||||||||||||||||!.!|||
         rSerLeuLysPheValProLysGlyLysGluThrSerAlaSerGlnAlaHis
 50299 : CTCGCTGAAGTTTGTCCCTAAAGGCAAAGAAACTTCTGCCTCCCAGGCGCAC : 50351

vulgar: SPP00000021_1.0 0 116 . GL397330.1:subseq(2333905,100351) 49999 50351 + 471 M 95 285 F 0 4 M 21 63
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-11-29
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
GL397330.1:subseq(2333905,100351)	exonerate:protein2genome:local	gene	50000	50351	471	+	.	gene_id 1 ; sequence SPP00000021_1.0 ; gene_orientation .
GL397330.1:subseq(2333905,100351)	exonerate:protein2genome:local	cds	50000	50351	.	+	.	
GL397330.1:subseq(2333905,100351)	exonerate:protein2genome:local	exon	50000	50351	.	+	.	insertions 0 ; deletions 0 ; frameshifts 4
GL397330.1:subseq(2333905,100351)	exonerate:protein2genome:local	similarity	50000	50351	471	+	.	alignment_id 1 ; Query SPP00000021_1.0 ; Align 50000 1 285 ; Align 50289 96 63
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis