genewise output Score 1146.29 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000019_1.0 139 CYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFS +YCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFS xYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFS GL397546.1:subs49997 Nttgcctgctggccgggggatcgggtagaggctgcccagggcactt gaggaatgatcgatgagcctatgatgcccgaggatatagcgccctc cccccgccgccgggcccccgcgcggcggtcgcggggcgccgcgccc SPP00000019_1.0 185 QADGRKVLRSSIREFLCSEAMFH QADGRKVLRSSIREFLCSEAMFH R:R[aga] QADGRKVLRSSIREFLCSEAMFH GL397546.1:subs50135 AGGTGGGCC Intron 1 CAGAcgggcagcctaacgtctaggatc <2-----[50137:55175]-2> acaggattgcgtgattggactta gcctcgcagcccggcgccacgcc SPP00000019_1.0 209 LGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRVASTFI LGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLR+ASTFI LGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRIASTFI GL397546.1:subs55246 cggcaacgggtgatgtaggcggttggacatgctaggtcagtata tgtcccgcgcgtccaccttgattaagacaaaagctttgtccctt gacccggccccggcgcgggccgcttttcataacgtggtatctca SPP00000019_1.0 253 FGSFEIFKSADEHTGRAGPSVGR FGSFEIFKSADEHTGRAGPSVGR R:R[agg] FGSFEIFKSADEHTGRAGPSVGR GL397546.1:subs55378 AGGTAATGC Intron 2 CAGGtgttgatatgggcagcggcagga <2-----[55380:57410]-2> tgctattaccaaacggcgcgtgg tactgttgtatgcagtacccggg SPP00000019_1.0 277 NDIRVQLLDYVISSFYPEIQAAHASDSVQRNAAFFRE NDIRVQLLDYVISSFYPEIQAAHASDSVQRNAAFFRE NDIRVQLLDYVISSFYPEIQAAHASDSVQRNAAFFRE GL397546.1:subs57481 agacgcccgtgaatttcgacggcgagagcaaggttcg aatgtattaattgctacataccacgagtagaccttga cctagggcctcccctccgcgtttccccggacccccgg SPP00000019_1.0 314 VTRRTARMVAEWQCVGFCHGVLNTDN VTRRTARMVAEWQCVGFCHGVLNTDN VTRRTARMVAEWQCVGFCHGVLNTDN GL397546.1:subs57592 GTCTGTG Intron 3 CAGgaccagcagggtctggttcggcaaga <0-----[57592:59063]-0>tcggccgttcagagtgtgagttacaa gggcgggggcgggcgcccccgcctcc SPP00000019_1.0 340 MSILGLTIDYGPFGFLD YDPDHV MSILGLTIDYGPFGFLD YDPDHV MSILGLTIDYGPFGFLD R:R[agg] YDPDHV GL397546.1:subs59142 aaacgcaagtgctgtcgAGGTAAGTG Intron 4 CAGGtgcgcg tgttgtctaagctgtta <2-----[59195:59513]-2> aacaat gccggcccccgctccgc cccccg SPP00000019_1.0 364 CNASDNTGRYAYSKQPEVCRWNLRKLAEALQPELPLELGEAILAEEFDA CNASDNTGRYAYSKQPEVC+WNL KLAEALQPELPLELGEAIL EEFDA CNASDNTGRYAYSKQPEVCKWNLGKLAEALQPELPLELGEAILVEEFDA GL397546.1:subs59533 tagtgaagctgtaaccggtatacgacgggcccgcccgcgggacgggtgg gaccaacggacagaacatgagatgatcactacatctatgactttaatac ctccccccctaccggtggcggcggggcgcggaggcgggtgccgcggttc SPP00000019_1.0 413 EFQRHYLQKMRRKLGLVQVELEEDGALVSKLLETMHLT EFQRHYLQKMRRKLGLVQVELEED ALVSKLLETMHLT EFQRHYLQKMRRKLGLVQVELEEDRALVSKLLETMHLT GL397546.1:subs59680 gtcactccaacaacgcgcggcgggagcgtaccgaacca atagaataatggatgttatataaagcttcattactatc gcagccggggcgggccggggggacggggcgcggcgcgc SPP00000019_1.0 451 ADFTNTFYLLSSFPVELESPGLA ADFTNTFYLLSSFPVE ESPGLA G:G[ggt] ADFTNTFYLLSSFPVEPESPGLA GL397546.1:subs59794 GGTGAGTG Intron 5 CAGGTggtaaatttcattcggcgtcgcg <1-----[59795:64776]-1> catcactattgctctacaccgtc cccaccccggcctaggaggacgg SPP00000019_1.0 475 EFLARLMEQCASLEELRLAFRPQMDP EFLARLMEQCASLEELRLAFRPQMDP EFLARLMEQCASLEELRLAFRPQMDP R:R[cgg] GL397546.1:subs64848 gtcgacagctgtcggcacgtcccagcCGGTGGGTA Intron 6 attcgttaagcctaatgtctgcatac <2-----[64928:65737] acgcgggggtccgagaggacgcggtc SPP00000019_1.0 501 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLEQLSAAE QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLEQLS AE QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLEQLSVAE GL397546.1:subs65735 CAGGcctaatacgctaccctgcagacggagagcgcggcctccgccaggg -2> atctttttcacacattcttgcgcgtcgatagtaaacgtaatgtca gacgggggagacaggcgcgctggcccggggtggggtgggggtgag SPP00000019_1.0 547 LQSRNQGHWADWLQAY ARLDKDL LQSRNQGHWADWLQAY ARLDKDL LQSRNQGHWADWLQAY R:R[aga] ARLDKDL GL397546.1:subs65874 ccaaacgctggtccgtAGGTGAGCC Intron 7 CAGAgccgagc taggaagagcagtaca <2-----[65924:66015]-2> cgtaaat ggcgcgccgttgaggc cgatgcg SPP00000019_1.0 571 EGAGDAAAWQAEHVRVMHANNPKYVLRNYIAQNAIEAAERGDFSE---- EG GDAAAW+AE VR+MHANNPKYVLRNYIAQNAIEAAERGDFSE EGTGDAAAWRAERVRMMHANNPKYVLRNYIAQNAIEAAERGDFSEASTC GL397546.1:subs66038 ggagggggtcggcgcaacgaacatgcaatagcagaggggcggttggaat agcgacccggcagtgttacaacaattgaatcaactaccaggatcacgcg accgttccggtgtgcggcccccgcgggcctggcccgtcgtgccagatac SPP00000019_1.0 616 ---------------------VRRVLKLLETPYHCEAGAATDAEATEAD VRRVLKLLETPYHCEAGAATD +ATEAD LSLWSLGGGRSQTPLTLMTLQVRRVLKLLETPYHCEAGAATDPQATEAD GL397546.1:subs66185 ctcttcgggctcaccacaaccgccgcaccgactctgggggagccgaggg tctgctggggcacctcttctatggttattaccaagacgcccacaccaca gcggcgagtgcgctctcgccgggggggaggctcccgggccaccgcggcc SPP00000019_1.0 644 GADGRQRSYSSKPPLWAAELCVT GADGRQRSYSSKPPLWAAELCVT GADGRQRSYSSKPPLWAAELCVT GL397546.1:subs66332 ggggaccttaaaccctgggctga gcaggagcaggacctgccatgtc ggccggcccctgcgcgaaagcga // Making a R in phase 2 intron Making a R in phase 2 intron Making a R in phase 2 intron Making a G in phase 1 intron Making a R in phase 2 intron Making a R in phase 2 intron >GL397546.1:subseq(159884,116409).pep xYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRKVLRSSIR EFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRIASTFIRFGSFE IFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHASDSVQRNAAFFREVTRRT ARMVAEWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDPDHVCNASDNTGRYAYSKQ PEVCKWNLGKLAEALQPELPLELGEAILVEEFDAEFQRHYLQKMRRKLGLVQVELEEDRA LVSKLLETMHLTGADFTNTFYLLSSFPVEPESPGLAEFLARLMEQCASLEELRLAFRPQM DPRQLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLEQLSVAELQSRNQGHWADW LQAYRARLDKDLEGTGDAAAWRAERVRMMHANNPKYVLRNYIAQNAIEAAERGDFSEAST CLSLWSLGGGRSQTPLTLMTLQVRRVLKLLETPYHCEAGAATDPQATEADGADGRQRSYS SKPPLWAAELCVT // >GL397546.1:subseq(159884,116409).[49997:66400].sp NGCTACTGCGGCCACCAGTTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGCCGCCATG TACCTGGGCGAGGTGTGCACGGCGACTGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCC GGGCCCACGCCCTTCTCCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCCAGCATCCGG GAGTTCCTGTGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACGCGGGCCGGCGCC TGCGTGACGTCCGAGTCCACGGTGGTGCGCGACGTGTTCTATGATGGTAATCCCAAATAT GAACAATGCACGGTTGTGTTGCGTATAGCTTCCACTTTCATAAGGTTTGGATCCTTTGAG ATTTTTAAGTCTGCAGATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGGAGGAACGAC ATTCGAGTGCAGCTGCTCGACTATGTCATCAGCTCCTTTTACCCCGAGATCCAGGCTGCT CATGCCAGCGACAGCGTGCAGAGAAACGCCGCCTTCTTCCGGGAGGTGACGCGGCGCACG GCGCGGATGGTGGCCGAGTGGCAGTGCGTGGGCTTCTGCCACGGCGTGCTCAACACTGAC AACATGAGCATCCTGGGGCTCACCATCGACTACGGGCCCTTTGGCTTCCTGGACAGGTAC GACCCCGACCACGTGTGCAATGCCTCCGACAACACCGGCCGCTATGCATACAGCAAGCAG CCTGAGGTGTGCAAGTGGAACCTGGGGAAGCTGGCCGAGGCCCTGCAGCCAGAGCTGCCC CTGGAGCTGGGTGAGGCCATCCTGGTCGAGGAGTTTGATGCCGAGTTCCAAAGGCACTAC CTGCAGAAGATGCGCAGGAAGCTGGGCCTCGTGCAGGTGGAGCTGGAGGAAGACAGGGCG CTGGTGTCCAAGCTCCTGGAGACCATGCACCTGACCGGTGCCGACTTCACAAACACCTTC TACTTGCTGAGCTCCTTTCCAGTGGAGCCAGAGTCGCCAGGCCTGGCGGAATTCCTGGCC AGGCTGATGGAGCAGTGTGCCTCCCTGGAAGAGCTAAGGCTGGCATTCCGGCCCCAGATG GATCCCCGGCAGCTATCCATGATGTTGATGCTGGCACAGTCAAACCCACAGCTGTTCGCG CTCATGGGCACTCGGGCGGGCATCGCCAGGGAGCTGGAGCGTGTGGAGCAGCAGTCTCGG CTGGAGCAGCTGAGTGTGGCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGATTGG CTACAGGCGTACAGAGCCCGGCTAGATAAGGACCTGGAAGGCACCGGGGATGCTGCCGCC TGGCGGGCTGAGCGTGTGCGCATGATGCACGCCAACAACCCCAAGTACGTGCTGAGGAAC TACATTGCGCAGAACGCCATCGAGGCTGCCGAGCGTGGGGACTTCTCAGAGGCAAGTACA TGCCTGTCCCTGTGGTCCCTGGGAGGGGGTCGGTCCCAGACCCCTCTCACTCTCATGACC CTCCAGGTGCGGCGGGTGCTGAAGCTACTGGAGACCCCTTACCACTGCGAGGCGGGGGCC GCCACAGACCCCCAGGCCACGGAGGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGC AGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACA // GL397546.1:subseq(159884,116409) GeneWise match 49997 66400 1170.25 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 49997 50136 0.00 + 0 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 50137 55175 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 55176 55379 0.00 + 1 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 55380 57410 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 57411 57591 0.00 + 1 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 57592 59063 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 59064 59194 0.00 + 0 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 59195 59513 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 59514 59794 0.00 + 1 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 59795 64776 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 64777 64927 0.00 + 2 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 64928 65737 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 65738 65923 0.00 + 1 GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise intron 65924 66015 0.00 + . GL397546.1:subseq(159884,116409)-genewise-prediction-1 GL397546.1:subseq(159884,116409) GeneWise cds 66016 66400 0.00 + 1 GL397546.1:subseq(159884,116409)-genewise-prediction-1 //