genewise output Score 778.69 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000015_1.0 1 MAGYEYVSPEQLAGFDKYK YSAVDTN MAGYEYVSPEQLAGFDKYK YSAVDTN MAGYEYVSPEQLAGFDKYK YSAVDTN GL397331.1:subs31916 aggtgtgacgccggtgataGTACTGC Intron 1 CAGtagggaa tcgaaatgcaatcgtaaaa<0-----[31973:50002]-0>agctaca gtacacgcggggtcttgcg cttgtct SPP00000015_1.0 27 PLSLYVMHPFWNTIVK VFPTWLAPNL PLSLYVMHPFWNTIVK VFPTWLAPNL PLSLYVMHPFWNTIVK VFPTWLAPNL GL397331.1:subs50024 cctctgaccttaaagaGTAAGAT Intron 2 TAGgtcatcgcac ctctattactgactta<0-----[50072:50531]-0>ttccgtccat attgtcgtatgctaag atttgggctg SPP00000015_1.0 53 ITFSGFLLVVFNFLLMAYFDPDFYAS ITFSGFLLVVFNFLLMAYFDPDFYAS ITFSGFLLVVFNFLLMAYFDPDFYAS A:A[gca] GL397331.1:subs50562 aattgtccggtatccagttgcgttgtGGTAAGAA Intron 3 tctcgttttttattttcatacatacc <1-----[50641:52841] atttctggtacttaagactttcttca SPP00000015_1.0 79 PGHKHVPDWVWIVVGILNFVAYTL PGHKHVPDWVWIVVGILNFVAYTL PGHKHVPDWVWIVVGILNFVAYTL GL397331.1:subs52839 CAGCAcgcacgcgtgtagggacatggtac -1> cgaaatcagtgtttgttattcact atcgtgtcgtgtaacccccaccta SPP00000015_1.0 104 GVDGKQARRTNSSTPLGELFDHG GVDGKQARRTNSSTPLGELFDHG D:D[gat] GVDGKQARRTNSSTPLGELFDHG GL397331.1:subs52916 GGTAAGGA Intron 4 CAGATggggacgcaaataactggctgcg <1-----[52917:57024]-1> gtagaacggcacgcctgattaag tgtagatcacttctcaggttttc SPP00000015_1.0 128 LDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYN LDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYN LDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYN GL397331.1:subs57096 cgatttgttggagttatgagtaggagtgctccctggttttactctgata taggcgtatttctacttgggccgtgttttatttgttttctttcagaaaa gttgattcttatttcctaaaattcttttttcgagatgttccgccgagtc SPP00000015_1.0 177 TGILFLPWGYDISQV TISFVYIVTAV TGILFLPWGYDISQV TISFVYIVTAV TGILFLPWGYDISQV TISFVYIVTAV GL397331.1:subs57243 agactcctgtgaacgGTAAGTA Intron 5 CAGaattgtagagg cgttttcggaatgat<0-----[57288:58885]-0>ctcttattcct agttcgagatctcgg ttttccagtgt SPP00000015_1.0 203 VGVEAWYEPFLFNFLYRDLFTAMII VGVEAWYEPFLFNFLYRDLFT MII VGVEAWYEPFLFNFLYRDLFTTMII G:G[ggt] GL397331.1:subs58919 gggggttgctctatttagctaaaaaGGTAAGAA Intron 6 tgtacgaactttattagattccttt <1-----[58995:73707] gatgcgtatcgttcatacactagtt SPP00000015_1.0 228 CALCVTLPMSLLNFF SYK CALCVTLPMSLLNFF SYK CALCVTLPMSLLNFF R:R[aga] SYK GL397331.1:subs73705 TAGGTtgttgaccaattattAGGTAAGTA Intron 7 CAGAata -1> gctgtctctgttatt <2-----[73757:75487]-2> gaa taatgttagtaactc cta SPP00000015_1.0 248 NNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMV NNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMV NNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMV GL397331.1:subs75498 aaatacatgtggagctttcttctattagtacttctgatgcccagtttag aactatactaacttcttccgtttttcccgttgcccattatacgttattt tccgactactatgtcattacggctgtaggctgatattagattagcctgt SPP00000015_1.0 297 GTAFANST CQLIVCQMSSTRCPTLN GTAFANST CQLIVCQMSSTRCPTLN GTAFANST CQLIVCQMSSTRCPTLN GL397331.1:subs75645 gagtgaaaGTAAGAT Intron 8 CAGtccagtcaaaactcata gcctcagc<0-----[75669:76880]-0>gatttgatggcggccta aactccta tggttcagttcgtatgt SPP00000015_1.0 322 WLLVPLFLVVLVVNLGVASYVES WLLVPLFLVVLVVNLGV SYVES -:C[tgt] WLLVPLFLVVLVVNLGVPSYVES GL397331.1:subs76932 TGGTTGCTC Intron 9 TGATttcgccttggtggacggcttgga <2-----[76934:77056]-2> gtttcttttttttatgtccatag gggttccgtcagacaaactctgc SPP00000015_1.0 345 ILLYTLTTAFTLAHIHYGVRV VKQLS ILLYTLTTAFTLAHIHYGVRV VKQLS ILLYTLTTAFTLAHIHYGVRV VKQLS GL397331.1:subs77127 acctataagtacgcactggcgGTGAGTA Intron 10 TAGgacca tttactccctctcataagtgt<0-----[77190:79397]-0>taatg tcgtaaattttgcccttaaag agggc SPP00000015_1.0 371 SHFQIYPFSLRKPNSDXLGMEEKNIGL SHFQIYPFSLRKPNSDXLGMEEKNIGL SHFQIYPFSLRKPNSDXLGMEEKNIGL GL397331.1:subs79413 actcatctttaacatgtcgaggaaagc gatatactctgacacagtgtaaaatgt cttgtcccaggaacataaagaagttcg // Making a A in phase 1 intron Making a D in phase 1 intron Making a G in phase 1 intron Making a R in phase 2 intron Making a C in phase 2 intron >GL397331.1:subseq(5541434,129493).pep MAGYEYVSPEQLAGFDKYKYSAVDTNPLSLYVMHPFWNTIVKVFPTWLAPNLITFSGFLL VVFNFLLMAYFDPDFYASAPGHKHVPDWVWIVVGILNFVAYTLDGVDGKQARRTNSSTPL GELFDHGLDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYNTGIL FLPWGYDISQVTISFVYIVTAVVGVEAWYEPFLFNFLYRDLFTTMIIGCALCVTLPMSLL NFFRSYKNNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMVGTAF ANSTCQLIVCQMSSTRCPTLNCWLLVPLFLVVLVVNLGVPSYVESILLYTLTTAFTLAHI HYGVRVVKQLSSHFQIYPFSLRKPNSDXLGMEEKNIGL // >GL397331.1:subseq(5541434,129493).[31916:79493].sp ATGGCTGGATACGAATACGTGAGCCCGGAGCAGCTGGCTGGCTTTGATAAGTACAAGTAC AGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTTTGGAACACTATA GTAAAGGTATTTCCTACTTGGCTGGCGCCCAATCTGATAACTTTTTCTGGCTTTCTGCTG GTTGTATTCAATTTTCTACTAATGGCATACTTTGATCCTGACTTTTATGCCTCAGCACCA GGTCACAAGCATGTGCCTGACTGGGTTTGGATTGTAGTAGGCATCCTCAACTTCGTAGCC TACACTCTAGATGGTGTGGATGGAAAGCAAGCTCGCAGAACCAATTCTAGCACTCCCTTA GGGGAGCTTTTTGATCATGGCCTGGATAGTTGGTCATGTGTTTACTTTGTTGTAACTGTT TATTCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTTATCTCCTGCTA TGGGTAGTTTTGTTTTCTTTCATCCTGTCCCACTGGGAAAAGTATAACACAGGGATTCTT TTCCTGCCATGGGGATATGACATTAGCCAGGTGACTATTTCTTTTGTCTACATAGTGACT GCGGTTGTGGGAGTTGAGGCCTGGTATGAACCTTTCCTGTTTAATTTCTTATATAGAGAC CTATTCACTACAATGATTATTGGTTGTGCATTATGTGTGACTCTTCCAATGAGTTTATTA AACTTTTTCAGAAGCTATAAAAATAACACCTTGAAACTCAATTCAGTCTATGAAGCTATG GTTCCCTTATTTTCTCCATGCTTGCTGTTCATTTTGTCTACAGCGTGGATCCTTTGGTCA CCTTCAGATATTTTAGAGCTACATCCTAGAGTGTTCTACTTTATGGTTGGAACAGCCTTT GCCAACAGTACATGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCAACTTTG AATTGTTGGTTGCTGGTTCCTCTCTTCTTGGTTGTCTTAGTGGTAAACCTAGGAGTACCC TCTTACGTTGAGAGCATTCTCCTGTATACATTAACAACTGCTTTTACTCTGGCCCACATC CATTATGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTTACCCCTTCTCA TTGAGGAAACCAAACTCAGATTGACTAGGAATGGAAGAAAAGAATATTGGCCTG // GL397331.1:subseq(5541434,129493) GeneWise match 31916 79493 778.69 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 31916 31972 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 31973 50002 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 50003 50071 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 50072 50531 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 50532 50640 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 50641 52841 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 52842 52916 0.00 + 2 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 52917 57024 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 57025 57287 0.00 + 2 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 57288 58885 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 58886 58994 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 58995 73707 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 73708 73756 0.00 + 2 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 73757 75487 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 75488 75668 0.00 + 1 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 75669 76880 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 76881 76933 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 76934 77056 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 77057 77189 0.00 + 1 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise intron 77190 79397 0.00 + . GL397331.1:subseq(5541434,129493)-genewise-prediction-1 GL397331.1:subseq(5541434,129493) GeneWise cds 79398 79493 0.00 + 0 GL397331.1:subseq(5541434,129493)-genewise-prediction-1 //