genewise output
Score 69.11 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000015_1.0   86 PDWVWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSC  
                     P W +++  +  F+  +LD +DGKQARRTNS +PLGELFDHG DS S   
                     PYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLST  
GL397326.1:subs50000 cttatcttgcgctatctcggaggacgaaaatttctggctgcgtgtcta  
                     cagcattgctgtttaactactagaacggcacgcctgattaaggactcc  
                     acgactatagatttcgagtcttgaacaaacttttaggctctttcttca  


SPP00000015_1.0  134                           YFVVTVYSIFGRGSTGVSVFVLY 
                                               ++ V   SI  R  T    F  + 
                               V:V[gta]        FMAVGA-SIAARLGTHPDWF--F 
GL397326.1:subs50144 GGTAAATT  Intron 1   CAGTAtagggg taggctgaccgtt  t 
                      <1-----[50145:50412]-1>  ttctgc ctccgtgcacagt  t 
                                               tgagat atctcaatttcgt  c 


SPP00000015_1.0  158 LLLWVVLFSFILSHWEKYNTGIL                           
                        ++ +F F  +HW+ Y +G+L                           
                     FCSFIGMFVFYCAHWQTYVSGVL                           
GL397326.1:subs50475 ttttagatgtttgctcatgtggt                           
                     tgcttgttttagcagacatcgtt                           
                     cctttggtgtttttggtttacgg                           


//
Making a V in phase 1 intron
>GL397326.1:subseq(6563047,100140).pep
PYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAVGASIAAR
LGTHPDWFFFCSFIGMFVFYCAHWQTYVSGVL
//
>GL397326.1:subseq(6563047,100140).[50000:50543].sp
CCATACTGGACATACCTTTTATGTGCACTGGGACTTTTTATTTACCAGTCACTGGATGCC
ATTGATGGGAAACAAGCCAGAAGAACAAACTCTTGTTCTCCTTTAGGGGAGCTCTTTGAC
CATGGTTGTGACTCTCTTTCCACAGTATTTATGGCAGTGGGAGCTTCAATTGCCGCTCGC
TTAGGAACTCATCCTGACTGGTTTTTCTTCTGCTCTTTTATTGGGATGTTTGTGTTTTAT
TGTGCTCATTGGCAGACTTATGTTTCAGGCGTGTTG
//
GL397326.1:subseq(6563047,100140)	GeneWise	match	50000	50543	70.11	+	.	GL397326.1:subseq(6563047,100140)-genewise-prediction-1
GL397326.1:subseq(6563047,100140)	GeneWise	cds	50000	50144	0.00	+	0	GL397326.1:subseq(6563047,100140)-genewise-prediction-1
GL397326.1:subseq(6563047,100140)	GeneWise	intron	50145	50412	0.00	+	.	GL397326.1:subseq(6563047,100140)-genewise-prediction-1
GL397326.1:subseq(6563047,100140)	GeneWise	cds	50413	50543	0.00	+	2	GL397326.1:subseq(6563047,100140)-genewise-prediction-1
//