genewise output Score 569.48 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000033_1.0 30 RSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTR R++S F P++ L S+RLT F+ +KG+GCKVPQ+ L KLL L RTMSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL-- GL397271.1:subs44051 aaatacgttacgatgtgaatccaatagcagagtagccggccatcgtt gctccgactacagaataagtgtcgtcatagcggatcaattaattact acgtgggctcgatcagcaccgacactaggcaccagcatcgaaggata SPP00000033_1.0 79 PDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPAL QE QE GA +P L --------------QENHFQEDEQFLGA----VMPRL GL397271.1:subs44192 cgactcgggctcgg gacac aaaataaaaattgc ttcgt ggcccaatggtgac tgagt SPP00000033_1.0 116 IGMDSCVIPLRHGGLSLVQTTDF IGMD+CVIPLRHGGLSLVQTTD+ G:G[ggc] IGMDTCVIPLRHGGLSLVQTTDY GL397271.1:subs44249 GGTAGGTA Intron 1 CAGGCagagatgactacggcttgcaagt <1-----[44250:50000]-1> tgtacgttctgaggtcttaccaa tagtttcttggctgtcgtacatc SPP00000033_1.0 140 FYPLVEDPYMM GRIACANVLSDLYAM +YP+V+DPYMM GRIACANVLSDLYAM IYPIVDDPYMM GRIACANVLSDLYAM GL397271.1:subs50072 atcagggctaaGTAAGCG Intron 2 CAGgaagtgagcagctga tacttaacatt<0-----[50105:53003]-0>ggtcgcattgatact tcgcacctcgg cgaatctcctcctag SPP00000033_1.0 166 GITECDNMLMLLSVSQSMSEE EREKV G+TECDNMLMLL VS M++ ER+KV GVTECDNMLMLLGVSNKMTDR ERDKV GL397271.1:subs53049 ggagtgaacaccggaaaaagaGTAAGTA Intron 3 TAGgagag gtcagaatttttgtgaatcag<0-----[53112:55398]-0>agaat gcgatctgggctacttagccg agtag SPP00000033_1.0 192 TPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFI PL+++GF+DAAEE GT+VTGGQTV+NPWI++GGVAT VCQPNEFI MPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFI GL397271.1:subs55414 accaacgtagggggggatgaggcagcactagcggggaagtccagta tctttagtaaccaacgcctcggacttacgtttggtccctgacaatt gtgtcattacatgaaagaagtcaaaaccgtcgaactctccgctatc SPP00000033_1.0 238 PDSAVVGDVLVLTKPLGTQVAVN PD+AV GDVLVLTKPLGTQVAV M:M[atg] PDNAVPGDVLVLTKPLGTQVAVA GL397271.1:subs55552 ATGTAAGTT Intron 4 CAGGcgaggcgggcgtaaccgacgggg <2-----[55554:59592]-2> caactcgattttcactgcatctc actagagcggggaacggaggagt SPP00000033_1.0 262 AHQWLDN PERWNKVKMVVSREEVELA HQWLD PE+WNK+K+VV++E+VELA VHQWLDI PEKWNKIKLVVTQEDVELA GL397271.1:subs59663 gcctcgaGTGAGTA Intron 5 TAGcgataaaacggacggggcg taagtat<0-----[59684:60943]-0>caagaatatttcaaatatc gcgggtt tgagtgtaagccaataggc SPP00000033_1.0 288 YQEAMFNMATLNRT AGLMHTFNA YQEAM+NMA LNRT AGLMHTFNA YQEAMMNMARLNRT A:A[gct] AGLMHTFNA GL397271.1:subs61001 tcggaaaagacaaaGGTATGAC Intron 6 CAGCTggcacatag aaacttatcgtagc <1-----[61044:67769]-1> cgttactac cgggggcgggccga aacgcgctc SPP00000033_1.0 312 HAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGR- HAATDITGFGILGH+QNLAKQQRNEVSFVIHNLP++AKMAAVSKA G HAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNM GL397271.1:subs67799 cggagaagtgatgcgcacgaccaaggttgacaccgcgaagggaagtgaa acccatcgtgttgacaatcaaagaatctttaatcttcatcctgacggat ccctccgccgtgctggcgcggggcgggtatcccgagcggtagcgccacg SPP00000033_1.0 360 FGLLQGTSAETS GLLICLPREQA FGL+ GT ETS GLLICLPREQA FGLMHGTCPETS G:G[ggc] GLLICLPREQA GL397271.1:subs67946 tgcacgatcgatGGTACAGG Intron 7 CAGGCgccattccgcg tgttagcgcacc <1-----[67983:71390]-1> gtttgtcgaac cccgcgccggta ctgctaatgaa SPP00000033_1.0 384 ARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATA ARFC+EIKS KYGEGHQAWI+GIVEKGNRTARIIDKPR+IEV P+ AT ARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQ GL397271.1:subs71426 gcttggaatcatgggccgtaagaggagacagaaagaccaagggccggac cgtgcataccaagagaacgttgttaagagccgttaacgttatccatcca tgctagagccattaccaagttgtaggcccagacacacgccgtaaagcta SPP00000033_1.0 433 AV V NV GL397271.1:subs71573 ag at cg // Making a G in phase 1 intron Making a M in phase 2 intron Making a A in phase 1 intron Making a G in phase 1 intron >GL397271.1:subseq(12257949,121578).pep RTMSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLG AVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTE CDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATT VCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQ EAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAK MAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVE KGNRTARIIDKPRIIEVAPQVATQNV // >GL397271.1:subseq(12257949,121578).[44051:71578].sp AGAACCATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTC CGGCTAACCAGATTCACTGAACTGAAGGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTG CAAAAATTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATGAGCAGTTTCTGGGA GCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGT GGGCTTTCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATG ATGGGCAGGATAGCATGTGCCAATGTCCTCAGTGACCTCTATGCAATGGGGGTCACGGAA TGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCGACAGGGAAAGGGAT AAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCA GTAACGGGTGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTCGCTACCACT GTCTGCCAGCCCAATGAATTTATCATGCCAGACAATGCAGTGCCAGGGGACGTGCTGGTG TTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGTGGCTGGATATTCCT GAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAG GAGGCGATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTC AATGCCCACGCCGCCACTGACATCACGGGCTTCGGGATTTTGGGCCATGCGCAGAACCTG GCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCCCGGTACTGGCCAAG ATGGCTGCAGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCG GAGACTTCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCA GAGATAAAGTCCCCCAAATATGGTGAAGGCCACCAAGCATGGATTATTGGGATTGTAGAG AAGGGCAACCGCACAGCGAGAATCATAGACAAACCCCGGATCATCGAGGTTGCACCACAA GTGGCCACTCAAAACGTG // GL397271.1:subseq(12257949,121578) GeneWise match 44051 71578 587.45 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 44051 44249 0.00 + 0 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 44250 50000 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 50001 50104 0.00 + 2 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 50105 53003 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 53004 53111 0.00 + 0 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 53112 55398 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 55399 55553 0.00 + 0 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 55554 59592 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 59593 59683 0.00 + 1 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 59684 60943 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 60944 61043 0.00 + 0 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 61044 67769 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 67770 67982 0.00 + 2 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise intron 67983 71390 0.00 + . GL397271.1:subseq(12257949,121578)-genewise-prediction-1 GL397271.1:subseq(12257949,121578) GeneWise cds 71391 71578 0.00 + 2 GL397271.1:subseq(12257949,121578)-genewise-prediction-1 //