genewise output Score 847.14 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000032_1.0 1 MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENH MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENH MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENH GL397271.1:subs50000 atacgttacgatgtgaatccaatagcagagtagccggccatcgttcgac tccgactacagaataagtgtcgtcatagcggatcaattaattactaaaa gtgggctcgatcagcaccgacactaggcaccagcatcgaaggataggcc SPP00000032_1.0 50 FQEDEQFLGAVMPRL IGMDTCVI FQEDEQFLGAVMPRL IGMDTCVI FQEDEQFLGAVMPRL G:G[ggc] IGMDTCVI GL397271.1:subs50147 tcgggctcgggacacGGTAGGTA Intron 1 CAGGCagagatga taaaaattgcttcgt <1-----[50193:55943]-1> tgtacgtt caatggtgactgagt tagtttct SPP00000032_1.0 74 PLRHGGLSLVQTTDYIYPIVDDPYMM PLRHGGLSLVQTTDYIYPIVDDPYMM PLRHGGLSLVQTTDYIYPIVDDPYMM GL397271.1:subs55970 ctacggcttgcaagtatcagggctaaGTAAGCG Intron 2 CAG ctgaggtcttaccaatacttaacatt<0-----[56048:58946]-0> tggctgtcgtacatctcgcacctcgg SPP00000032_1.0 100 GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR GL397271.1:subs58947 gaagtgagcagctgaggagtgaacaccggaaaaaga ggtcgcattgatactgtcagaatttttgtgaatcag cgaatctcctcctaggcgatctgggctacttagccg SPP00000032_1.0 136 ERDKVMPLIIQGFKDAAEEAGTSVTG ERDKVMPLIIQGFKDAAEEAGTSVTG ERDKVMPLIIQGFKDAAEEAGTSVTG GL397271.1:subs59055 GTAAGTA Intron 3 TAGgagagaccaacgtagggggggatgag <0-----[59055:61341]-0>agaattctttagtaaccaacgcctcg agtaggtgtcattacatgaaagaagt SPP00000032_1.0 162 GQTVLNPWIVLGGVATTVCQPNEFI GQTVLNPWIVLGGVATTVCQPNEFI GQTVLNPWIVLGGVATTVCQPNEFI M:M[atg] GL397271.1:subs61420 gcagcactagcggggaagtccagtaATGTAAGTT Intron 4 gacttacgtttggtccctgacaatt <2-----[61497:65535] caaaaccgtcgaactctccgctatc SPP00000032_1.0 187 PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI GL397271.1:subs65533 CAGGcgaggcgggcgtaaccgacgggggcctcga -2> caactcgattttcactgcatctctaagtat actagagcggggaacggaggagtgcgggtt SPP00000032_1.0 218 PEKWNKIKLVVTQEDVELAYQEAMMN PEKWNKIKLVVTQEDVELAYQEAMMN PEKWNKIKLVVTQEDVELAYQEAMMN GL397271.1:subs65627 GTGAGTA Intron 5 TAGcgataaaacggacggggcgtcggaaa <0-----[65627:66886]-0>caagaatatttcaaatatcaaactta tgagtgtaagccaataggccgggggc SPP00000032_1.0 244 MARLNRT AGLMHTFNAHAATDIT MARLNRT AGLMHTFNAHAATDIT MARLNRT A:A[gct] AGLMHTFNAHAATDIT GL397271.1:subs66965 agacaaaGGTATGAC Intron 6 CAGCTggcacatagcggagaa tcgtagc <1-----[66987:73712]-1> cgttactacacccatc gggccga aacgcgctcccctccg SPP00000032_1.0 268 GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GL397271.1:subs73763 gtgatgcgcacgaccaaggttgacaccgcgaagggaagtgaatgcacga gtgttgacaatcaaagaatctttaatcttcatcctgacggattgttagc ccgtgctggcgcggggcgggtatcccgagcggtagcgccacgcccgcgc SPP00000032_1.0 317 CPETS GLLICLPREQAARFCAEI CPETS GLLICLPREQAARFCAEI CPETS G:G[ggc] GLLICLPREQAARFCAEI GL397271.1:subs73910 tcgatGGTACAGG Intron 7 CAGGCgccattccgcggcttgga gcacc <1-----[73926:77333]-1> gtttgtcgaaccgtgcat cggta ctgctaatgaatgctaga SPP00000032_1.0 341 KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG GL397271.1:subs77390 atcatgggccgtaagaggagacagaaagaccaagggccggacagacacg accaagagaacgttgttaagagccgttaacgttatccatccaatacccg gccattaccaagttgtaggcccagacacacgccgtaaagctacgtcacg SPP00000032_1.0 390 ATS ATS ATS GL397271.1:subs77537 gat ccc cct // Making a G in phase 1 intron Making a M in phase 2 intron Making a A in phase 1 intron Making a G in phase 1 intron >GL397271.1:subseq(12252006,127545).pep MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAV MPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECD NMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVC QPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEA MMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMA AVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKG NRTARIIDKPRIIEVAPQVATQNVNPTPGATS // >GL397271.1:subseq(12252006,127545).[50000:77545].sp ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTA ACCAGATTCACTGAACTGAAGGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAA TTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATGAGCAGTTTCTGGGAGCCGTT ATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGC AGGATAGCATGTGCCAATGTCCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGAC AATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCGACAGGGAAAGGGATAAAGTG ATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCAGTAACG GGTGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTCGCTACCACTGTCTGC CAGCCCAATGAATTTATCATGCCAGACAATGCAGTGCCAGGGGACGTGCTGGTGTTGACA AAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGTGGCTGGATATTCCTGAGAAA TGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCG ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTCAATGCC CACGCCGCCACTGACATCACGGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAG CAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCCCGGTACTGGCCAAGATGGCT GCAGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACT TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATA AAGTCCCCCAAATATGGTGAAGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGC AACCGCACAGCGAGAATCATAGACAAACCCCGGATCATCGAGGTTGCACCACAAGTGGCC ACTCAAAACGTGAATCCCACACCCGGGGCCACCTCT // GL397271.1:subseq(12252006,127545) GeneWise match 50000 77545 847.14 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 50000 50192 0.00 + 0 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 50193 55943 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 55944 56047 0.00 + 2 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 56048 58946 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 58947 59054 0.00 + 0 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 59055 61341 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 61342 61496 0.00 + 0 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 61497 65535 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 65536 65626 0.00 + 1 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 65627 66886 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 66887 66986 0.00 + 0 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 66987 73712 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 73713 73925 0.00 + 2 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise intron 73926 77333 0.00 + . GL397271.1:subseq(12252006,127545)-genewise-prediction-1 GL397271.1:subseq(12252006,127545) GeneWise cds 77334 77545 0.00 + 2 GL397271.1:subseq(12252006,127545)-genewise-prediction-1 //